From bc91ee702ef6a1b913bdde4964fad97d0dee5c3c Mon Sep 17 00:00:00 2001
From: James Devine <devine.jd@gmail.com>
Date: Sat, 31 Dec 2016 02:09:02 +0100
Subject: [PATCH]

---
 CosmicScanner | 52 ++++++++++++++++++++++++++++++++++++++++++---------
 1 file changed, 43 insertions(+), 9 deletions(-)

diff --git a/CosmicScanner b/CosmicScanner
index 170802a..8edc862 100644
--- a/CosmicScanner
+++ b/CosmicScanner
@@ -1,6 +1,9 @@
 //Cosmic Pi histogram program
 //this compiles histograms from the ADC for different HV Bias levels
 //it is used to profile the detection of muons and noise
+//updated to give horizontal row output rather than columns, easier to process
+//only prints values from 500 to 1500
+//the first set of samples seem to be noisy for some reason (?)
 
 unsigned long start_time;
 unsigned long stop_time;
@@ -57,10 +60,28 @@ void setup() {
 
 void loop() {
   //reads in on channel 0
+ Serial.print("index");
+    Serial.print("; Ch A & B; ");
+      
+    for (int i = 500; i < 1500; i++) {
 
+      //Serial.print(i);
+      Serial.print(i);
+      Serial.print("; ");
+      //Serial.println(histogramb[i]);
+      //Serial.print("; ");
+    
+    }
+    Serial.println();
+   
   for (hvset = 0x70; hvset > 0x50; hvset--) {
     returnValue = bitBang(hvset); // Transmit data
 
+    for (int i = 0; i < 4096; i++) {
+      histograma[i] = 0;
+      histogramb[i] = 0;
+    }
+    
     for (int j = 0; j < 100000; j++) {
 
       for (int i = 0; i < 1000; i++) {
@@ -80,20 +101,33 @@ void loop() {
         histogramb[int(values[i + 1000])]++;
       }
     }
-    for (int i = 0; i < 4096; i++) {
+    Serial.print(hvset);
+    Serial.print("; Ch A; ");
+      
+    for (int i = 500; i < 1500; i++) {
 
-      Serial.print(hvset);
-      Serial.print("; ");
-      Serial.print(i);
-      Serial.print("; ");
+      //Serial.print(i);
       Serial.print(histograma[i]);
       Serial.print("; ");
-      Serial.println(histogramb[i]);
+      //Serial.println(histogramb[i]);
+      //Serial.print("; ");
+    
     }
-    for (int i = 0; i < 4096; i++) {
-      histograma[i] = 0;
-      histogramb[i] = 0;
+    Serial.println();
+    Serial.print(hvset);
+    Serial.print("; Ch B; ");
+      
+    for (int i = 500; i < 1500; i++) {
+
+      //Serial.print(i);
+      //Serial.print(histograma[i]);
+      //Serial.print("; ");
+      Serial.print(histogramb[i]);
+      Serial.print("; ");
+    
     }
+    Serial.println();
+    
     //Serial.println(cyclecounter);
 
     //  delay(2000);