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Added omicron, based on 2 early studies.

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For test use only.
This commit is contained in:
jdevine 2021-12-17 14:09:42 +01:00
parent 6bd8b70241
commit 59f05b1c24
4 changed files with 11 additions and 2 deletions
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2
cara/apps/calculator/model_generator.py
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@ -694,7 +694,7 @@ MECHANICAL_VENTILATION_TYPES = {'mech_type_air_changes', 'mech_type_air_supply',
MASK_TYPES = {'Type I', 'FFP2'}
MASK_WEARING_OPTIONS = {'mask_on', 'mask_off'}
VENTILATION_TYPES = {'natural_ventilation', 'mechanical_ventilation', 'no_ventilation'}
VIRUS_TYPES = {'SARS_CoV_2', 'SARS_CoV_2_B117', 'SARS_CoV_2_P1', 'SARS_CoV_2_B16172'}
VIRUS_TYPES = {'SARS_CoV_2', 'SARS_CoV_2_B117', 'SARS_CoV_2_P1', 'SARS_CoV_2_B16172', 'SARS_CoV_2_Omicron'}
VOLUME_TYPES = {'room_volume_explicit', 'room_volume_from_dimensions'}
WINDOWS_OPENING_REGIMES = {'windows_open_permanently', 'windows_open_periodically', 'not-applicable'}
WINDOWS_TYPES = {'window_sliding', 'window_hinged', 'not-applicable'}

3
cara/apps/calculator/templates/calculator.form.html.j2
View file

@ -69,7 +69,8 @@
<option value="SARS_CoV_2">SARS-CoV-2 (nominal strain)</option>
<option value="SARS_CoV_2_B117">SARS-CoV-2 (Alpha VOC)</option>
<option value="SARS_CoV_2_P1">SARS-CoV-2 (Gamma VOC)</option>
<option selected value="SARS_CoV_2_B16172">SARS-CoV-2 (Delta VOC)</option>
<option value="SARS_CoV_2_B16172">SARS-CoV-2 (Delta VOC)</option>
<option selected value="SARS_CoV_2_Omicron">SARS-CoV-2 (Omicron VOC)</option>
</select>
</div>
</div>

4
cara/models.py
View file

@ -481,6 +481,10 @@ Virus.types = {
viral_load_in_sputum=1e9,
infectious_dose=30/1.6,
),
'SARS_CoV_2_Omicron': SARSCoV2(
viral_load_in_sputum=1e9,
infectious_dose=50/4.334,
),
}

4
cara/monte_carlo/data.py
View file

@ -57,6 +57,10 @@ virus_distributions = {
viral_load_in_sputum=symptomatic_vl_frequencies,
infectious_dose=60/1.6,
),
'SARS_CoV_2_Omicron': mc.SARSCoV2(
viral_load_in_sputum=symptomatic_vl_frequencies,
infectious_dose=50/4.334,
),
}