add test comment

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markus 2021-02-05 16:37:57 +01:00
parent cd3e90823e
commit 8ec19f8e85

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@ -9,6 +9,8 @@ import matplotlib.pyplot as plt
import matplotlib.patches as patches
from sklearn.neighbors import KernelDensity
# This is a test comment
USE_SCOEH = False
scoeh_vl_frequencies = ((1.880302953, 2.958422139, 3.308759599, 3.676921581, 4.036604757, 4.383770594,
@ -186,6 +188,7 @@ class MCInfectedPopulation(MCPopulation):
return quad(integrand, 0.1, 30)[0] * 1e-6
@functools.lru_cache()
def emission_rate_when_present(self) -> np.ndarray:
"""
Randomly samples values for the quantum generation rate
@ -485,7 +488,7 @@ baseline_mc_exposure_model = MCExposureModel(
samples=200000,
qid=100,
breathing_category=1,
english_variant=False
english_variant=True
)
),
exposed=models.Population(
@ -496,8 +499,54 @@ baseline_mc_exposure_model = MCExposureModel(
)
)
models = [MCExposureModel(
concentration_model=MCConcentrationModel(
room=models.Room(volume=45),
ventilation=models.SlidingWindow(
active=models.PeriodicInterval(period=120, duration=10),
inside_temp=models.PiecewiseConstant((0, 24), (293,)),
outside_temp=models.PiecewiseConstant((0, 24), (283,)),
window_height=1.6, opening_length=0.6,
),
infected=MCInfectedPopulation(
number=1,
presence=models.SpecificInterval(((0, 4), (5, 9))),
masked=True,
virus=MCVirus(halflife=1.1),
expiratory_activity=1,
samples=200000,
qid=100,
breathing_category=1,
english_variant=e
)
),
exposed=models.Population(
number=2,
presence=models.SpecificInterval(((0, 4), (5, 9))),
activity=models.Activity.types['Seated'],
mask=models.Mask.types['No mask']
)
) for e in (False, True)]
present_model(baseline_mc_exposure_model.concentration_model)
original_pi, english_pi = [model.infection_probability() for model in models]
print(f"Median(P_i) - Original: {'{:.2f}'.format(np.median(original_pi))}%\n"
f"Mean(P_i) - Original: {'{:.2f}'.format(np.mean(original_pi))}%\n\n"
f"Median(P_i) - English: {'{:.2f}'.format(np.median(english_pi))}%\n"
f"Mean(P_i) - English: {'{:.2f}'.format(np.mean(english_pi))}%\n")
plt.hist(original_pi, bins=200)
plt.yticks([], [])
plt.xlabel('Percentage Probability of infection')
plt.show()
plt.violinplot((original_pi, english_pi), positions=(1, 2), showmeans=True, showmedians=True)
plt.xticks(ticks=[1, 2], labels=['Original', 'English'])
plt.ylabel('Percentage probability of infection')
plt.show()
# pis = baseline_mc_exposure_model.infection_probability()
# plt.hist(pis, bins=2000)
# plt.title("Distribution of probabilities of infection")