diff --git a/app/covid-calculator.ipynb b/app/covid-calculator.ipynb deleted file mode 100644 index f663be53..00000000 --- a/app/covid-calculator.ipynb +++ /dev/null @@ -1,370 +0,0 @@ -{ - "cells": [ - { - "cell_type": "code", - "execution_count": 182, - "metadata": {}, - "outputs": [], - "source": [ - "import ipywidgets as w" - ] - }, - { - "cell_type": "code", - "execution_count": 183, - "metadata": { - "pycharm": { - "name": "#%%\n" - } - }, - "outputs": [], - "source": [ - "name_text = w.Text(placeholder=\"E.g. Workshop without masks\", description=\"Simulation name:\",\n", - " style={'description_width': 'auto'}, layout=w.Layout(width='auto'))\n", - "room_number_text = w.Text(placeholder=\"E.g. 17/R-033\", description=\"Room number:\",\n", - " style={'description_width': 'auto'}, layout=w.Layout(width='auto'))\n", - "intro_box = w.VBox(children=(w.HTML(value='CARA Covid Calculator'),\n", - " name_text,\n", - " room_number_text),\n", - " layout=w.Layout(padding='0px 0px 50px 0px'))" - ] - }, - { - "cell_type": "code", - "execution_count": 184, - "metadata": { - "pycharm": { - "name": "#%%\n" - } - }, - "outputs": [], - "source": [ - "volume_text = w.Text(placeholder=\"Room volume (m³)\", description=\"Room volume\", layout=w.Layout(width='auto'))\n", - "area_text = w.Text(placeholder=\"Room floor area (m²)\", description=\"Floor area\", layout=w.Layout(width='auto'))\n", - "height_text = w.Text(placeholder=\"Room ceiling height (m²)\", description=\"Ceiling height\", layout=w.Layout(width='auto'))\n", - "\n", - "room_dimensions_box = w.VBox(children=(volume_text, w.Label(value=\"------- OR -------\"),area_text, height_text),\n", - " layout=w.Layout(padding='0px 0px 50px 0px'))\n", - "\n", - "def manage_room_text_fields(_):\n", - " volume_text.disabled = bool(area_text.value) or bool(height_text.value)\n", - " area_text.disabled = bool(volume_text.value)\n", - " height_text.disabled = bool(volume_text.value)\n", - "\n", - "for text in [volume_text, area_text, height_text]:\n", - " text.observe(manage_room_text_fields)\n", - " text.style.description_width = \"auto\"\n", - "\n", - "volume_text.observe(manage_room_text_fields)\n", - "area_text.observe(manage_room_text_fields)\n", - "height_text.observe(manage_room_text_fields)" - ] - }, - { - "cell_type": "code", - "execution_count": 185, - "metadata": { - "pycharm": { - "name": "#%%\n" - } - }, - "outputs": [], - "source": [ - "ventilation_label = w.Label(\"Ventilation type:\")\n", - "mechanical_button = w.ToggleButton(value=False, description='Mechanical', layout={'width': 'auto'})\n", - "natural_button = w.ToggleButton(value=False, description='Natural', layout={'width': 'auto'})\n", - "\n", - "acph_text = w.Text(description=\"Air changes per hour\", style={'description_width': 'auto'}, layout=w.Layout(width='auto'))\n", - "asfr_text = w.Text(description=\"Air supply flow rate\", style={'description_width': 'auto'}, layout=w.Layout(width='auto'))\n", - "\n", - "w.jsdlink((acph_text, 'value'), (asfr_text, 'disabled'))\n", - "w.jsdlink((asfr_text, 'value'), (acph_text, 'disabled'))\n", - "\n", - "mech_vent_box = w.VBox(\n", - " children=(acph_text, w.Label(value=\"------- OR -------\"), asfr_text),\n", - " layout=w.Layout(display='none', width='auto')\n", - ")\n", - "\n", - "number_of_windows_text = w.Text(description='Number of windows:', style={'description_width': 'auto'},\n", - " layout=w.Layout(width='auto'))\n", - "height_of_window_text = w.Text(description='Height of window:', placeholder='meters',\n", - " style={'description_width': 'auto'}, layout=w.Layout(width='auto'))\n", - "width_of_window_text = w.Text(description='Width of window:', placeholder='meters', style={'description_width': 'auto'},\n", - " layout=w.Layout(width='auto'))\n", - "opening_distance_text = w.Text(description='Opening distance:', placeholder='centimeters', style={'description_width': 'auto'},\n", - " layout=w.Layout(width='auto'))\n", - "window_open_buttons = w.RadioButtons(options=('Always', '15 min / 2h'), layout=w.Layout(width='auto'))\n", - "\n", - "nat_vent_box = w.VBox(\n", - " children=(\n", - " number_of_windows_text,\n", - " opening_distance_text,\n", - " width_of_window_text,\n", - " opening_distance_text,\n", - " w.HBox(children=(\n", - " w.Label('Windows open', layout=w.Layout(width='auto')),\n", - " window_open_buttons\n", - " ))\n", - " ),\n", - " layout=w.Layout(display='none', width='auto'),\n", - ")\n", - "\n", - "\n", - "\n", - "tab_bar = w.HBox(children=(mechanical_button, natural_button))\n", - "ventilation_type_menu = w.VBox(children=(ventilation_label, tab_bar), layout=w.Layout(padding='0px 0px 20px 0px'))\n", - "ventilation_box = w.VBox(children=(ventilation_type_menu, mech_vent_box, nat_vent_box),\n", - " layout=w.Layout(padding='0px 0px 50px 0px'))\n", - "\n", - "def handle_natural_toggle(_):\n", - " if natural_button.value:\n", - " mechanical_button.value = False\n", - " ventilation_box.children[2].layout.display = 'contents'\n", - " else:\n", - " ventilation_box.children[2].layout.display = 'none'\n", - "\n", - "def handle_mechanical_toggle(_):\n", - " if mechanical_button.value:\n", - " natural_button.value = False\n", - " ventilation_box.children[1].layout.display = 'contents'\n", - " else:\n", - " ventilation_box.children[1].layout.display = 'none'\n", - "\n", - "natural_button.observe(handle_natural_toggle)\n", - "mechanical_button.observe(handle_mechanical_toggle)\n", - "left_column = w.VBox(children=(intro_box, room_dimensions_box, ventilation_box),\n", - " layout=w.Layout(width='25%', padding=\"0px 20px 0px 0px\"))" - ] - }, - { - "cell_type": "code", - "execution_count": 186, - "metadata": { - "pycharm": { - "name": "#%%\n" - }, - "scrolled": false - }, - "outputs": [], - "source": [ - "event_data_label = w.Label(\"Event data:\")\n", - "attendees_label = w.Label(\"Attendees:\")\n", - "total_people_text = w.Text(description=\"Total number of people:\", style={'description_width': 'auto'},\n", - " layout=w.Layout(width='auto'))\n", - "infected_people_text = w.Text(description=\"Number of infected people:\", style={'description_width': 'auto'},\n", - " layout=w.Layout(width='auto'))\n", - "activity_dropdown = w.Dropdown(description=\"Activity type:\", options=[\"Training\", \"Workshop\", \"Office\"], value=None,\n", - " layout=w.Layout(width='auto'))\n", - "start_hour = w.Dropdown(options=[\"HH\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(24)], value=\"HH\")\n", - "start_minute = w.Dropdown(options=[\"MM\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(60)], value=\"MM\")\n", - "finish_hour = w.Dropdown(options=[\"HH\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(24)], value=\"HH\")\n", - "finish_minute = w.Dropdown(options=[\"MM\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(60)], value=\"MM\")\n", - "start_box = w.VBox(children=(w.Label(\"Start:\"),\n", - " w.HBox(children=(start_hour, start_minute))),\n", - " layout=w.Layout(padding=\"0px 20px 0px 0px\"))\n", - "finish_box = w.VBox(children=(w.Label(\"Finish:\"),\n", - " w.HBox(children=(finish_hour, finish_minute))))\n", - "event_time_box = w.HBox(children=(start_box, finish_box), layout=w.Layout(width='auto'))\n", - "\n", - "event_intro_box = w.VBox(children=(event_data_label,\n", - " attendees_label,\n", - " total_people_text,\n", - " infected_people_text,\n", - " activity_dropdown,\n", - " event_time_box),\n", - " layout=w.Layout(padding=\"50px 0px 20px 0px\"))\n", - "\n", - "months = (\"january\", \"february\", \"march\", \"april\", \"may\", \"june\",\n", - " \"july\", \"august\", \"september\", \"october\", \"november\", \"december\")\n", - "\n", - "single_button = w.ToggleButton(value=False, description='Single event', layout={'width': 'auto'})\n", - "recurrent_button = w.ToggleButton(value=False, description='Recurrent usage', layout={'width': 'auto'})\n", - "single_recurrent_selection_bar = w.HBox(children=(single_button, recurrent_button), layout=w.Layout(width='auto'), style={'description_width': 'auto'})\n", - "month_dropdown = w.Dropdown(options=months, value=None, description=\"Month:\", layout=w.Layout(width='auto'), style={'description_width': 'auto'})\n", - "day_dropdown = w.Dropdown(options=[i for i in range(1, 32)], value=None, description=\"Day:\", layout=w.Layout(width='auto'))\n", - "date_selector = w.HBox(children=(month_dropdown, day_dropdown), layout=w.Layout(display='none', width='auto'))\n", - "\n", - "months_bar = w.HBox(children=[w.ToggleButton(value=False, description=month[0].upper()) for month in months],\n", - " layout = w.Layout(display='none'))\n", - "\n", - "def handle_single_click(_):\n", - " if single_button.value:\n", - " date_selector.layout.display = 'contents'\n", - " recurrent_button.value = False\n", - " else:\n", - " date_selector.layout.display = 'none'\n", - "\n", - "def handle_recurrent_click(_):\n", - " if recurrent_button.value:\n", - " months_bar.layout.display = 'contents'\n", - " single_button.value = False\n", - " else:\n", - " months_bar.layout.display = 'none'\n", - "\n", - "single_button.observe(handle_single_click)\n", - "recurrent_button.observe(handle_recurrent_click)\n", - "\n", - "date_box = w.VBox(children=(w.HBox(children=(single_button, recurrent_button)),\n", - " w.HBox(children=(date_selector, months_bar))),\n", - " layout=w.Layout(padding=\"0px 0px 30px 0px\"))\n", - "\n", - "lunch_start_hour = w.Dropdown(options=[\"HH\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(24)],\n", - " value=\"HH\", disabled=True)\n", - "lunch_start_minute = w.Dropdown(options=[\"MM\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(60)],\n", - " value=\"MM\", disabled=True)\n", - "lunch_finish_hour = w.Dropdown(options=[\"HH\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(24)],\n", - " value=\"HH\", disabled=True)\n", - "lunch_finish_minute = w.Dropdown(options=[\"MM\"] + [(\"0\" + str(i)) if len(str(i)) == 1 else str(i) for i in range(60)],\n", - " value=\"MM\", disabled=True)\n", - "lunch_start_box = w.VBox(children=(w.Label(\"Start:\"),\n", - " w.HBox(children=(lunch_start_hour, lunch_start_minute))),\n", - " layout=w.Layout(padding=\"0px 20px 0px 0px\"))\n", - "lunch_finish_box = w.VBox(children=(w.Label(\"Finish:\"),\n", - " w.HBox(children=(lunch_finish_hour, lunch_finish_minute))))\n", - "lunch_time_box = w.HBox(children=(lunch_start_box, lunch_finish_box), layout=w.Layout(width='auto'))\n", - "\n", - "lunch_button = w.ToggleButton(value=False, description=\"Lunch break\")\n", - "\n", - "def handle_lunch(_):\n", - " for dropdown in (lunch_start_hour, lunch_start_minute, lunch_finish_hour, lunch_finish_minute):\n", - " dropdown.disabled = not lunch_button.value\n", - "\n", - "lunch_button.observe(handle_lunch)\n", - "\n", - "lunch_break_box = w.VBox(children=(lunch_button, lunch_time_box), layout=w.Layout(padding='0px 0px 20px 0px'))\n", - "\n", - "coffee_button = w.ToggleButton(value=False, description=\"Coffee breaks\")\n", - "coffee_breaks_text = w.Text(description=\"Number of breaks:\", disabled=True, style={'description_width': 'auto'},\n", - " layout=w.Layout(width='auto'))\n", - "coffee_duration = w.Dropdown(description=\"Duration:\", options=[\"MM\"] + [str(i) for i in range(1, 31)], value=\"MM\",\n", - " disabled=True, style={'description_width': 'auto'}, layout=w.Layout(width='auto'))\n", - "regular_breaks_label = w.Label(\"Regular breaks are spread evenly throughout the day\")\n", - "coffee_break_box = w.VBox(children=(coffee_button, coffee_breaks_text, coffee_duration, regular_breaks_label))\n", - "def handle_coffee_button(_):\n", - " coffee_duration.disabled = not coffee_button.value\n", - " coffee_breaks_text.disabled = not coffee_button.value\n", - "\n", - "coffee_button.observe(handle_coffee_button)\n", - "break_box = w.VBox(children=(lunch_break_box, coffee_break_box))\n", - "\n", - "middle_column = w.VBox(children=(event_intro_box, date_box, break_box),\n", - " layout=w.Layout(width='40%', padding='0px 20px 0px 0px'))" - ] - }, - { - "cell_type": "code", - "execution_count": 187, - "metadata": { - "pycharm": { - "name": "#%%\n" - } - }, - "outputs": [], - "source": [ - "mask_label = w.Label(\"Mask wearing:\")\n", - "mask_buttons = w.ToggleButtons(options=[\"Continuous\", \"Removed when seated >2m\"])\n", - "mask_box = w.VBox(children=(mask_label, mask_buttons), layout=w.Layout(padding='50px 0px 30px 0px'))\n", - "\n", - "info_box = w.HTML(value=''\n", - " '
This tool estimates the risk of COVID-19 spread. It is based on current scientific data and '\n", - " 'can be used to provide an illustration for different real world scenarios.
How to use this tool:
'\n", - " 'Room data
'\n", - " 'Enter the data about the area you wish to study. You can find these in GIS, or by measuring '\n", - " 'them yourself.
For mechanical ventilation, you should check with a specialist for the '\n", - " 'air flow or air change rate.
Event data
'\n", - " 'Enter the total number of people and how many you assume are infected.
Activity types:
'\n", - " 'Office = typical scenario all persons seated, talking quietly.
'\n", - " 'Workshop = assembly workshop environment, all persons doing light exercise, talking.
'\n", - " 'Training = one person standing, talking, all others seated, breathing normally.
'\n", - " 'Seminar = As training, but all participants take turns in standing and talking.
'\n", - " 'You should specify if the event is a one off (give date) or recurrent use of the same space '\n", - " 'for the same activity, in which case tick the months when the activity takes place.
'\n", - " 'Specify if a lunch break should be included, and when it starts/stops.
'\n", - " 'If you will take coffee breaks, they are spread out evenly throughout the day, '\n", - " 'in addition to lunch.
Mask wearing: Specify if they are worn all the time, '\n", - " 'or only when less than 2 meters apart.
',\n", - " layout=w.Layout(padding='0px 0px 30px 0px'))\n", - "\n", - "report_button = w.Button(description=\"Generate report\")\n", - "\n", - "right_column = w.VBox(children=(mask_box, info_box, report_button), layout=w.Layout(width='35%'))\n", - "\n", - "components = {'name_text', 'room_number_text', 'volume_text', 'area_text', 'height_text', 'mechanical_button',\n", - " 'acph_text', 'asfr_text', 'natural_button', 'number_of_windows_text', 'height_of_window_text',\n", - " 'width_of_window_text', 'opening_distance_text', 'opening_distance_text', 'window_open_buttons',\n", - " 'total_people_text', 'infected_people_text', 'activity_dropdown', 'start_hour', 'start_minute',\n", - " 'finish_hour', 'finish_minute', 'single_button', 'recurrent_button', 'month_dropdown', 'day_dropdown',\n", - " 'lunch_button', 'lunch_start_hour', 'lunch_start_minute', 'lunch_finish_hour', 'lunch_finish_minute',\n", - " 'coffee_button', 'coffee_breaks_text', 'coffee_duration', 'mask_buttons'}\n", - "components.update(set(months))\n", - "\n", - "def get_value(component_name: str):\n", - " assert component_name in components, f\"{component_name} is not the name of any UI-element with a value-attribute. \" \\\n", - " \"Valid names are:\\n\" + '\\n'.join(sorted(components))\n", - " if component_name in months:\n", - " return months_bar.children[months.index(component_name)].value\n", - "\n", - " return globals()[component_name].value" - ] - }, - { - "cell_type": "code", - "execution_count": 188, - "metadata": { - "pycharm": { - "name": "#%%\n" - } - }, - "outputs": [ - { - "data": { - "application/vnd.jupyter.widget-view+json": { - "model_id": "ed8a32168798491b94b149a42af469a2", - "version_major": 2, - "version_minor": 0 - }, - "text/plain": [ - "HBox(children=(VBox(children=(VBox(children=(HTML(value='CARA Covid Calculator')…" - ] - }, - "metadata": {}, - "output_type": "display_data" - } - ], - "source": [ - "w.HBox(children=(left_column, middle_column, right_column))" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "metadata": {}, - "outputs": [], - "source": [] - } - ], - "metadata": { - "kernelspec": { - "display_name": "Python 3", - "language": "python", - "name": "python3" - }, - "language_info": { - "codemirror_mode": { - "name": "ipython", - "version": 3 - }, - "file_extension": ".py", - "mimetype": "text/x-python", - "name": "python", - "nbconvert_exporter": "python", - "pygments_lexer": "ipython3", - "version": "3.8.5" - } - }, - "nbformat": 4, - "nbformat_minor": 1 -} \ No newline at end of file