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2 commits

Author SHA1 Message Date
Luis Aleixo
ef0a83146a Changed plot's width when window width < 900px 2021-08-31 11:31:48 +02:00
Luis Aleixo
ff9d115596 Resizable SVG components on concentration plot 2021-08-31 10:47:07 +02:00
2 changed files with 110 additions and 86 deletions

View file

@ -1,62 +1,52 @@
/* Generate the concentration plot using d3 library. */
function draw_concentration_plot(svg_id, times, concentrations, exposed_presence_intervals) {
var visBoundingBox = d3.select(svg_id)
.node()
.getBoundingClientRect();
var time_format = d3.timeFormat('%H:%M');
var data = []
times.map((time, index) => data.push({ 'time': time, 'hour': new Date().setHours(Math.trunc(time), (time - Math.trunc(time)) * 60), 'concentration': concentrations[index] }))
times.map((time, index) => data.push({'time': time, 'hour': new Date().setHours(Math.trunc(time), (time - Math.trunc(time)) * 60), 'concentration': concentrations[index] }))
var vis = d3.select(svg_id),
width = visBoundingBox.width - 300,
height = visBoundingBox.height,
margins = { top: 30, right: 20, bottom: 50, left: 50 },
var plot_div = document.getElementById(svg_id);
var height = plot_div.clientHeight;
var width; // To be defined later
// H:M time format for x axis.
xRange = d3.scaleTime().range([margins.left, width - margins.right]).domain([data[0].hour, data[data.length - 1].hour]),
xTimeRange = d3.scaleLinear().range([margins.left, width - margins.right]).domain([data[0].time, data[data.length - 1].time]),
bisecHour = d3.bisector((d) => { return d.hour; }).left,
var vis = d3.select(plot_div).append('svg').attr('height', height);
var margins = { top: 30, right: 20, bottom: 50, left: 50 };
yRange = d3.scaleLinear().range([height - margins.bottom, margins.top]).domain([0., Math.max(...concentrations)]),
// H:M time format for x axis.
var xRange = d3.scaleTime().domain([data[0].hour, data[data.length - 1].hour]);
var xTimeRange = d3.scaleLinear().domain([data[0].time, data[data.length - 1].time]);
var bisecHour = d3.bisector((d) => { return d.hour; }).left;
xAxis = d3.axisBottom(xRange).tickFormat(d => time_format(d)),
yAxis = d3.axisLeft(yRange);
// Plot tittle.
vis.append('svg:foreignObject')
.attr("background-color", "transparent")
.attr('width', width)
.attr('height', margins.top)
.style('text-align', 'center')
.html('<b>Mean concentration of virions</b>');
var yRange = d3.scaleLinear().range([height - margins.bottom, margins.top]).domain([0., Math.max(...concentrations)]);
var yAxis = d3.axisLeft(yRange);
// Line representing the mean concentration.
var lineFunc = d3.line()
.defined(d => !isNaN(d.concentration))
.x(d => xTimeRange(d.time))
.y(d => yRange(d.concentration))
.curve(d3.curveBasis);
vis.append('svg:path')
.attr('d', lineFunc(data))
var lineFunc = d3.line();
var draw_line = vis.append('svg:path')
.attr('stroke', '#1f77b4')
.attr('stroke-width', 2)
.attr('fill', 'none');
// Plot tittle.
var plotTitleEl = vis.append('svg:foreignObject')
.attr("background-color", "transparent")
.attr('height', margins.top)
.style('text-align', 'center')
.html('<b>Mean concentration of virions</b>');
// X axis declaration.
vis.append('svg:g')
var xAxisEl = vis.append('svg:g')
.attr('class', 'x axis')
.attr('transform', 'translate(0,' + (height - margins.bottom) + ')')
.call(xAxis);
.attr('transform', 'translate(0,' + (height - margins.bottom) + ')');
// X axis label.
vis.append('text')
var xAxisLabelEl = vis.append('text')
.attr('class', 'x label')
.attr('fill', 'black')
.attr('text-anchor', 'middle')
.attr('x', (width + margins.right) / 2)
.attr('y', height * 0.97)
.text('Time of day')
@ -77,63 +67,41 @@ function draw_concentration_plot(svg_id, times, concentrations, exposed_presence
.text('Mean concentration (virions/m³)');
// Area representing the presence of exposed person(s).
exposed_presence_intervals.forEach(b => {
var curveFunc = d3.area()
.x(d => xTimeRange(d.time))
.y0(height - margins.bottom)
.y1(d => yRange(d.concentration));
vis.append('svg:path')
.attr('d', curveFunc(data.filter(d => {
return d.time >= b[0] && d.time <= b[1]
})))
var exposedArea = {};
var drawArea = {};
exposed_presence_intervals.forEach((b, index) => {
exposedArea[index] = d3.area();
drawArea[index] = vis.append('svg:path')
.attr('fill', '#1f77b4')
.attr('fill-opacity', '0.1');
})
});
// Legend for the plot elements - line and area.
var size = 20
vis.append('rect')
.attr('x', width + size)
var legendLineIcon = vis.append('rect')
.attr('y', margins.top + size)
.attr('width', 20)
.attr('height', 3)
.style('fill', '#1f77b4');
vis.append('rect')
.attr('x', width + size)
.attr('y', 3 * size)
.attr('width', 20)
.attr('height', 20)
.attr('fill', '#1f77b4')
.attr('fill-opacity', '0.1');
// var legendAreaIcon = vis.append('rect')
// .attr('y', 3 * size)
// .attr('width', 20)
// .attr('height', 20)
// .attr('fill', '#1f77b4')
// .attr('fill-opacity', '0.1');
vis.append('text')
.attr('x', width + 3 * size)
.attr('y', margins.top + size)
.text('Mean concentration')
.style('font-size', '15px')
.attr('alignment-baseline', 'central');
// var legendLineText = vis.append('text')
// .attr('y', margins.top + size)
// .text('Mean concentration')
// .style('font-size', '15px')
// .attr('alignment-baseline', 'central');
vis.append('text')
.attr('x', width + 3 * size)
.attr('y', margins.top + 2 * size)
.text('Presence of exposed person(s)')
.style('font-size', '15px')
.attr('alignment-baseline', 'central');
// Legend bounding box.
vis.append('rect')
.attr('width', 275)
.attr('height', 50)
.attr('x', width * 1.005)
.attr('y', margins.top + 5)
.attr('stroke', 'lightgrey')
.attr('stroke-width', '2')
.attr('rx', '5px')
.attr('ry', '5px')
.attr('stroke-linejoin', 'round')
.attr('fill', 'none');
// var legendAreaText = vis.append('text')
// .attr('y', margins.top + 2 * size)
// .text('Presence of exposed person(s)')
// .style('font-size', '15px')
// .attr('alignment-baseline', 'central');
// Tooltip.
var focus = vis.append('svg:g')
@ -162,15 +130,65 @@ function draw_concentration_plot(svg_id, times, concentrations, exposed_presence
.attr('x', 18)
.attr('y', 18);
vis.append('rect')
var toolBox = vis.append('rect')
.attr('fill', 'none')
.attr('pointer-events', 'all')
.attr('width', width - margins.right)
.attr('height', height)
.on('mouseover', () => { focus.style('display', null); })
.on('mouseout', () => { focus.style('display', 'none'); })
.on('mousemove', mousemove);
function redraw() {
// Extract the width and height.
var width = plot_div.clientWidth;
if (width >= 900) width = 900;
// Use the extracted size to set the size of the SVG element.
vis.attr("width", width);
// Reduce width so that legend elements can be rendered
//width = width * 0.66;
// Redefine the variables according to the new clientWidth.
xRange.range([margins.left, width - margins.right]);
xTimeRange.range([margins.left, width - margins.right]);
lineFunc.defined(d => !isNaN(d.concentration))
.x(d => xTimeRange(d.time))
.y(d => yRange(d.concentration));
draw_line.attr("d", lineFunc(data));
plotTitleEl.attr('width', width);
var xAxis = d3.axisBottom(xRange).tickFormat(d => time_format(d));
xAxisEl.call(xAxis);
xAxisLabelEl.attr('x', (width + margins.right) / 2);
exposed_presence_intervals.forEach((b, index) => {
exposedArea[index].x(d => xTimeRange(d.time))
.y0(height - margins.bottom)
.y1(d => yRange(d.concentration));
drawArea[index].attr('d', exposedArea[index](data.filter(d => {
return d.time >= b[0] && d.time <= b[1]
})));
});
legendLineIcon.attr('x', width + size);
// legendAreaIcon.attr('x', width + size);
// legendLineText.attr('x', width + 3 * size);
// legendAreaText.attr('x', width + 3 * size);
toolBox.attr('width', width - margins.right);
}
// Draw for the first time to initialize.
redraw();
function mousemove() {
var x0 = xRange.invert(d3.pointer(event, this)[0]),
i = bisecHour(data, x0, 1),
@ -181,4 +199,9 @@ function draw_concentration_plot(svg_id, times, concentrations, exposed_presence
focus.select('#tooltip-time').text('x = ' + time_format(d.hour));
focus.select('#tooltip-concentration').text('y = ' + d.concentration.toFixed(2));
}
// Redraw based on the new size whenever the browser window is resized.
window.addEventListener("resize", redraw);
}

View file

@ -86,12 +86,13 @@
{% endblock report_summary_footnote %}
</div>
<p id="section1">* The results are based on the parameters and assumptions published in the CERN Open Report <a href="https://cds.cern.ch/record/2756083"> CERN-OPEN-2021-004</a>.</p>
<svg id="result_plot" width="900" height="400"></svg>
<div id="result_plot" style="height: 400px"></div>
<script type="application/javascript">
var times = {{times}}
var concentrations = {{concentrations}}
var exposed_presence_intervals = {{exposed_presence_intervals}}
draw_concentration_plot("#result_plot", times, concentrations, exposed_presence_intervals);
draw_concentration_plot("result_plot", times, concentrations, exposed_presence_intervals);
</script>
</p>
</div>