Commit graph

  • 5e2f013a8e
    Changed link to template.xlsx master James Devine 2025-08-15 15:39:01 +0200
  • 1e81c39bb2
    Added CO2 template to structure James Devine 2025-08-15 15:33:49 +0200
  • 4496c4d271
    Create CO2_template.xlsx James Devine 2025-08-15 15:33:15 +0200
  • 219207320a Merge branch 'feature/dynamic_groups' into 'master' Andre Henriques 2025-07-24 19:31:09 +0000
  • f15fa1c0fd CHANGELOG and version number updated Nicolas Mounet 2025-07-24 16:16:01 +0200
  • e0088c49ec Fixing report text in the static case (removing reference to a group id) Nicolas Mounet 2025-07-24 11:41:46 +0200
  • 71fa7df8a2 Updating some mypy and pyinstrument dependencies Nicolas Mounet 2025-07-24 10:42:12 +0200
  • c8904b983e Fixing typing issues Nicolas Mounet 2025-07-24 10:40:12 +0200
  • 6b878f7347 Fix in error message, in form_validator.py Nicolas Mounet 2025-07-24 06:04:11 +0000
  • 29ce7c817b Cosmetics in form_validator.py (error messages with input keys in double quotes) Nicolas Mounet 2025-07-23 14:47:29 +0000
  • d83dfa01df Cosmetics in test_model_generator.py (error messages with input keys in double quotes) Nicolas Mounet 2025-07-23 14:47:07 +0000
  • 31e31f22cd Fixing typing bug introduced in form_validator.py Nicolas Mounet 2025-07-23 09:36:22 +0000
  • 5281ba5b58 Cosmetic change in virus_report_data.py Nicolas Mounet 2025-07-23 09:10:50 +0000
  • 9104bf7c05 Fixing tests in test_model_generator.py following previous commits (error messages slightly changed) Nicolas Mounet 2025-07-23 08:36:04 +0000
  • 2ab4649113 Cosmetics in form_validator.py Nicolas Mounet 2025-07-23 07:58:28 +0000
  • d05b2b09a8 Some typing added in form_validator.py Nicolas Mounet 2025-07-23 07:32:50 +0000
  • 690e6e5d7b Small edits in form_validator.py Nicolas Mounet 2025-07-23 06:29:52 +0000
  • 2658e36add updated expiration definition lrdossan 2025-04-09 12:52:05 +0200
  • a61d065b83 added population models generation (infected and exposed) lrdossan 2025-03-25 15:16:45 +0100
  • a56ad5f77a updates following reviewing process: - replaced 'dynamic_exposed_occupancy', 'dynamic_infected_occupancy' and 'dynamic_occupancy' by 'occupancy' that encompasses both - developed respective functionality, including CAiMIRA UI and REST API - simplified logic with entry overlaps and respective validation - simplified CO2 logic with dynamic groups - simplified logic with alternative scenarios - changed default identifier of unique group - handled naming conventions - updated existing tests and added new tests for the most recent structure - generate docscrings update lrdossan 2025-03-21 17:35:49 +0100
  • 53c1f22375 pep8 format in virus_report_controller lrdossan 2025-02-27 11:07:42 +0100
  • 4094eeff1b Added validation __post_init__ check in ExposureModelGroup class and respective tests lrdossan 2025-02-03 10:00:33 +0100
  • 61c6b2c2c3 Enhancements for Dynamic and Static Occupancy Handling - Added default 'static' keyword to single group with static occupancy - Added default values for 'dynamic_exposed_occupancy' and 'dynamic_infected_occupancy' - Adapted default model to use ExposureModelGroup instance when static occupancy is defined - Updated JS methods to generate multiple plots when dynamic occupancy is defined - Handled the alternative scenario generation when dynamic occupancy is defined - Improved results generation for exposure groups - Updated HTML report for visualising results across multiple groups - Enhanced model representations lrdossan 2025-01-28 16:49:21 +0100
  • d46b5846a1 fix to model_start_end and reproduction number methods lrdossan 2024-12-19 16:46:19 +0000
  • cd3df90c4c Added dynamic groups in backend and propagated required changes to requests - Correction of typos lrdossan 2024-10-03 16:44:28 +0200
  • c50f9b4ad7 Merge branch 'next-release' into 'master' Nicola Tarocco 2025-03-13 13:51:30 +0000
  • d78865ab88
    release: v4.17.8 Nicola 2025-03-13 14:47:49 +0100
  • f17e33de82 Merge branch 'implement-preflight' into 'master' Nicola Tarocco 2025-03-13 13:46:56 +0000
  • 97dd9aab58
    api: implement preflight request Nicola 2025-03-03 19:50:38 -0500
  • b535d94910 Merge branch 'feature/CO2_times_endpoints' into 'master' Nicola Tarocco 2025-03-13 13:38:04 +0000
  • 893421ad23 updated documentation lrdossan 2025-03-12 15:54:57 +0100
  • 50e654bdbf Updated API methods that return ventilation transition times lrdossan 2025-03-12 15:54:47 +0100
  • 62f782c92e Merge branch 'bugfix/README' into 'master' Luis Aleixo 2025-02-10 10:51:04 +0000
  • 356dfca1df updated version lrdossan 2025-02-10 11:44:49 +0100
  • 9aa661bcdc Bugfix in README href lrdossan 2024-12-16 09:06:04 +0100
  • e4ac942af9 Merge branch 'feature/co2_endpoints' into 'master' Luis Aleixo 2025-02-07 14:19:54 +0000
  • 1299a5a638 Updated REST API documentation lrdossan 2025-02-06 17:14:18 +0100
  • 0237bc0c77 added routing to the suggested ventilation transition times lrdossan 2025-02-06 16:59:00 +0100
  • c57fd94431 Merge branch 'feature/pypi-version-release' into 'master' Luis Aleixo 2024-12-04 16:38:36 +0100
  • 04fb99848a increased version lrdossan 2024-12-04 16:21:33 +0100
  • 61c034c1d6 added manifest lrdossan 2024-12-04 16:21:18 +0100
  • 778444adf6 Merge branch 'pypi-releases' into 'master' Luis Aleixo 2024-12-03 14:13:54 +0100
  • 90fd2a503d moved section of test instance of pypi to development section in code > rest api page lrdossan 2024-12-03 10:45:57 +0100
  • f4b3b1b571 final update to installation md Andre Henriques 2024-12-02 14:00:00 +0100
  • 1c3f0f5278 cleaned sphinx conf file lrdossan 2024-12-02 11:35:01 +0100
  • 1eee08dbc9 updated installation structure lrdossan 2024-12-02 11:34:45 +0100
  • 640c4c5e28 changed project main URL lrdossan 2024-12-02 11:33:53 +0100
  • a2c76d8551 updated copyright lrdossan 2024-12-02 11:33:43 +0100
  • 987ad74531 suggestions for installation.md Andre Henriques 2024-11-30 21:30:30 +0100
  • 6b3efb9345 releases: add PyPI config Nicola Tarocco 2024-10-21 23:24:16 +0200
  • a93e69787e Merge branch 'changes/REST_API_adjustments' into 'master' Andre Henriques 2024-11-29 12:49:36 +0100
  • 9f3a406d46 Update on entire docs: - Added landing page for REST API and handled route package structure - Alphabetically ordered form inputs and fixed documentation on REST API - Added new logo in documentation UI and added section for REST API in documentation lrdossan 2024-11-27 15:36:11 +0100
  • 50edc1adb7 Merge branch 'changes/data_schema' into 'master' Luis Aleixo 2024-11-25 11:07:46 +0100
  • 78286ec2a9 adapted infectiousness_days reference lrdossan 2024-11-21 16:30:04 +0100
  • 33cc378ebe data registry update lrdossan 2024-09-23 16:25:11 +0200
  • 515c8ef118 Merge branch 'bugfix/docker_pre_built' into 'master' Luis Aleixo 2024-11-21 11:44:48 +0100
  • 8d346c3e4e changed release date lrdossan 2024-11-21 11:20:24 +0100
  • 40b47722e1 Updated docker instruction to use the pre-built image lrdossan 2024-11-21 11:18:18 +0100
  • 539bf60d02 Merge branch 'bugfix/doc_refs' into 'master' Luis Aleixo 2024-11-20 16:48:59 +0100
  • 700bd786dd Corrected user guide and about doc refs lrdossan 2024-11-20 16:27:19 +0100
  • 6b96d7c4ff Merge branch 'feature/mkdocs_material' into 'master' Luis Aleixo 2024-11-20 15:36:31 +0100
  • a34efcac88 Project documentation and CI/CD improvements: - Added docs folder with MkDocs and Sphinx integration for documentation. - Updated GitLab CI/CD configuration to include documentation jobs. - Improved Dockerfile for streamlined builds. - Added JavaScript file to support MathJax for equations in MkDocs. - Created and included a UML diagram for architectural overview. - Removed unused files to clean up the repository. - Updated project and package README files for consistency. - Revised diameter-dependent documentation for clarity. - Added detailed REST API documentation. - Updated project version for release tracking. - Included open-source acknowledgments in the documentation. - Added repository details and UI instructions to the user guide. - Integrated CO2 fitting algorithm into the project. - Included logo on the main documentation page and added CI/CD prod job. Nicola Tarocco 2024-10-13 23:02:01 +0200
  • 424f4f4804 Merge branch 'changes/CO2_review' into 'master' Luis Aleixo 2024-11-05 11:08:46 +0100
  • 9cf5f5d7a5 Updated minor version lrdossan 2024-11-05 09:47:41 +0100
  • 2703553a36 added ignore types upon package update (setuptools) lrdossan 2024-10-16 16:57:40 +0200
  • 8146224392 Added the two plot img, plot data to the return data of the fetch return (context). Adapted orders of labels lrdossan 2024-10-16 16:16:12 +0200
  • 6e16feb380 Merge branch 'feature/github_ci' into 'master' Luis Aleixo 2024-10-23 16:38:14 +0200
  • 23c8a349b2 Merge branch 'bugfix/type_checks' into 'master' Luis Aleixo 2024-10-22 10:06:57 +0200
  • b8da113aba updated readme lrdossan 2024-10-22 09:56:24 +0200
  • 1b56a6acd9 added conditionals type checks lrdossan 2024-10-22 09:56:16 +0200
  • 5ab7fca081 Merge branch 'fix/os-deployments' into 'master' Nicola Tarocco 2024-10-21 22:01:25 +0200
  • 51c08147a7
    ci: replace only/except with rules Nicola Tarocco 2024-10-13 23:02:01 +0200
  • 252b942259 Merge branch 'changes/version_update' into 'master' Luis Aleixo 2024-10-16 11:04:08 +0200
  • 5ae84aeda3 version update (4.17.3) lrdossan 2024-10-16 10:45:48 +0200
  • 66c6faac79 Merge branch 'changes/UI_HEPA' into 'master' Andre Henriques 2024-10-15 17:44:50 +0200
  • d00df39d1b update on labels lrdossan 2024-10-15 16:47:55 +0200
  • 4b30f6aaed
    openshift: update yamls and checks Nicola Tarocco 2024-10-13 22:17:19 +0200
  • 3a5cf42b3a
    openshift: move to Deployment Nicola Tarocco 2024-10-13 21:21:44 +0200
  • c4aa3cbd8c Merge branch 'fix/rest-api-infrastructure' into 'master' Nicola Tarocco 2024-10-13 21:17:30 +0200
  • cd9214a727 added eACH to HEPA question lrdossan 2024-10-11 16:17:14 +0200
  • 4e1a0bc32b
    readme: fix missing export variable Nicola Tarocco 2024-10-10 09:49:41 +0200
  • c3aef63c48
    docker: fix wrong cmd to build auth-service Nicola Tarocco 2024-10-10 09:45:52 +0200
  • 0ccbfe4f9a
    api: add Ddocker example Nicola Tarocco 2024-10-08 23:29:14 +0200
  • 72a6afece2
    docker: fix docker-compose Nicola Tarocco 2024-10-08 22:37:02 +0200
  • 349f2dfa85 testing new github ci file lrdossan 2024-10-07 16:36:21 +0200
  • 09f0514935 Merge branch 'bugfix/API_refinement' into 'master' Luis Aleixo 2024-09-20 11:20:11 +0200
  • bbd1ae094b Version update lrdossan 2024-09-19 17:21:48 +0200
  • 11f90a3b15 added missing catch exceptions lrdossan 2024-09-19 15:50:17 +0200
  • 38b4a51b6b Modified ci.yml lrdossan 2024-09-19 11:10:20 +0200
  • 3926bb7c34 fixed router and controllers lrdossan 2024-09-17 16:18:00 +0200
  • 7a5e33c524 removed unused instruction lrdossan 2024-09-17 16:16:08 +0200
  • eef7bd422f Merge branch 'feature/dynamic_occupancy_UI' into 'master' Luis Aleixo 2024-09-19 11:01:56 +0200
  • 492587b8b3 updated version to 4.17.0a2 lrdossan 2024-09-19 10:44:19 +0200
  • f7a4b32da1 version update lrdossan 2024-09-16 16:23:05 +0200
  • bfa20d5e06 updated validation method (and extra test) lrdossan 2024-09-16 16:22:54 +0200
  • b92bbb6334 changes after rebase from master lrdossan 2024-09-16 14:48:46 +0200
  • e545d99190 handled probabilistic exposure from review lrdossan 2024-09-03 14:32:27 +0200
  • 3c20ed0306 handled expected number of new cases calculation (including tests) lrdossan 2024-08-07 14:34:22 +0100
  • 13c112b656 added validation for short range interactions lrdossan 2024-07-22 11:19:57 +0200
  • a4be817c72 added dynamic occupancy possibility to co2 fitting algorithm lrdossan 2024-07-22 10:10:00 +0200