Nicola Tarocco
|
00ff1af71d
|
fix enums for data service
|
2023-12-14 15:34:08 +01:00 |
|
Luis Aleixo
|
20e8bf1df7
|
added data_service attr where needed
|
2023-12-14 15:34:08 +01:00 |
|
Nicola Tarocco
|
bb51eaa360
|
config: inject data registry instance instead of static config
* closes #365
|
2023-12-14 15:34:08 +01:00 |
|
Luis Aleixo
|
3da67c8c95
|
add superclass FormData for CO2FormData and VirusFormData
|
2023-11-21 09:45:42 +01:00 |
|
Luis Aleixo
|
3dc0364d2e
|
optimised validation method
|
2023-11-21 09:43:29 +01:00 |
|
Luis Aleixo
|
7da8cc438e
|
back-end updates for co2 logic
|
2023-11-21 09:42:16 +01:00 |
|
Luis Aleixo
|
a80c804832
|
added visualisation for ach table in form and report
|
2023-11-21 09:42:15 +01:00 |
|
Luis Aleixo
|
827327b70e
|
removed unused references from report generator
|
2023-11-21 09:40:27 +01:00 |
|
Luis Aleixo
|
e75846a3b2
|
generate initial CO2 plot
|
2023-11-21 09:40:27 +01:00 |
|
Luis Aleixo
|
3f75fc77cd
|
injected parameters in models, model and report generator
|
2023-10-26 16:29:20 +02:00 |
|
Luis Aleixo
|
4f1a497954
|
modified env var fetch method
|
2023-09-13 09:49:06 +02:00 |
|
Nicolas Mounet
|
f8530d4724
|
Centering the interval for vl uncertainty computation in report generator -> improving test accuracy
|
2023-09-01 15:21:04 +02:00 |
|
Luis Aleixo
|
27da077493
|
added full vl value on key of viral load
|
2023-08-04 11:17:10 +02:00 |
|
Luis Aleixo
|
77143c13c0
|
added vl_data on percentiles
|
2023-08-03 16:16:26 +02:00 |
|
Luis Aleixo
|
1abfe3cfe5
|
added a method to manufacture conditional probability and send it in the report
|
2023-08-03 15:01:31 +02:00 |
|
Luis Aleixo
|
96e9aead44
|
removed manufacture viral load scenarios method and related references
|
2023-08-03 15:01:06 +02:00 |
|
Luis Aleixo
|
6622315dd9
|
changed mypy type
|
2023-07-31 17:33:44 +02:00 |
|
Luis Aleixo
|
7d338d3e2d
|
separated vl method and added a test file
|
2023-07-28 17:39:17 +02:00 |
|
Luis Aleixo
|
fe60e1703f
|
added mypy typing check
|
2023-07-28 17:39:17 +02:00 |
|
Luis Aleixo
|
b6051778eb
|
modified method to calculate conditional probability
|
2023-07-28 17:39:16 +02:00 |
|
Luis Aleixo
|
43630cda2c
|
added logarithm of viral load distribution to jinja variable
|
2023-07-14 11:23:42 +02:00 |
|
Luis Aleixo
|
2d1e8af30f
|
added viral load distribution as a variable to display in the front-end side
|
2023-07-12 17:11:03 +02:00 |
|
Luis Aleixo
|
800578f031
|
adjustments to d3 plot
|
2023-06-12 15:19:06 +02:00 |
|
Luis Aleixo
|
bc7dae3610
|
changed CO2 label and added hlines with legends
|
2023-06-12 15:19:06 +02:00 |
|
Luis Aleixo
|
b17a1b991a
|
modified draw alternative scenarios method to be a generic plot and added export CO2 cvs data
|
2023-06-12 15:19:06 +02:00 |
|
Luis Aleixo
|
e67960e035
|
added methods to generate CO2 model
|
2023-06-12 15:19:06 +02:00 |
|
Luis Aleixo
|
d04869ce16
|
added generation of conditional probability of infection values based on form condition
|
2023-06-02 14:42:38 +02:00 |
|
Luis Aleixo
|
7542683da2
|
added two more viral load scenarios
|
2023-06-01 17:20:39 +02:00 |
|
Luis Aleixo
|
96b6a84b76
|
improved report generator methods
|
2023-06-01 16:31:04 +02:00 |
|
Luis Aleixo
|
207606e97e
|
added more vl values for calculation
|
2023-05-31 16:52:30 +02:00 |
|
Luis Aleixo
|
ca786d7e7f
|
added results with different viral load values
|
2023-05-31 16:36:56 +02:00 |
|
Luis Aleixo
|
0cb6477cb2
|
modified file name and references. removed unused variables
|
2023-05-26 09:44:47 +02:00 |
|
Luis Aleixo
|
1171e51f90
|
removed private reference for DEFAULT_DATA variables
|
2023-05-25 16:43:45 +02:00 |
|
Luis Aleixo
|
022abad186
|
updated branch according to review: - new presence_interval() method in the population class that avoids repetition of if conditions through the code. - typo fix. -tests were updated accordingly
|
2023-04-28 12:05:30 +02:00 |
|
Nicolas Mounet
|
fe19cb5976
|
Change all normalization factors and emission rates (when present) into 'per person' quantities (i.e. do not normalize anymore by the number of infected people) - to allow dynamic number of infected people. Changing the test accordingly, and the documentation. Adding a __post_init__ check in ExposureModel to forbid the use of dynamic number of exposed people, for now.
|
2023-04-28 08:54:59 +02:00 |
|
Luis Aleixo
|
fe7cbf45b7
|
added expert apps validation for presence times
|
2023-04-28 08:54:58 +02:00 |
|
Luis Aleixo
|
a3d66b8463
|
updated number of points per hour to be 15 instead of 25
|
2023-04-26 15:16:33 +02:00 |
|
Luis Aleixo
|
e4636e5fe6
|
interesting times to be proportional to the simulation time
|
2023-04-26 15:16:33 +02:00 |
|
Luis Aleixo
|
308c469f81
|
updated plot labels and legend
|
2023-03-31 09:55:39 +02:00 |
|
Luis Aleixo
|
de07bdcd79
|
adapted method for uncertainties plot
|
2023-03-31 09:55:38 +02:00 |
|
Luis Aleixo
|
f199e974d5
|
added checkbox for conditional probability generation
|
2023-03-31 09:55:38 +02:00 |
|
Luis Aleixo
|
8b25fb631c
|
removed tqdm package
|
2023-03-31 09:55:38 +02:00 |
|
Luis Aleixo
|
d7039a958a
|
added method to generate P(I|vl) uncertainties graphs
|
2023-03-31 09:55:38 +02:00 |
|
Luis Aleixo
|
188ed7a531
|
added mean line on histogram plot
|
2023-03-31 09:55:38 +02:00 |
|
Luis Aleixo
|
f54aab1d46
|
d3 implementation for poi bins
|
2023-03-31 09:55:38 +02:00 |
|
Luis Aleixo
|
1146cf76c9
|
modified templates to consider a relative path
|
2023-03-17 12:08:58 +01:00 |
|
Luis Aleixo
|
87318a72c8
|
check for nan values on probabilistic exposure
|
2022-12-15 16:12:30 +00:00 |
|
Luis Aleixo
|
4ab95fcfaa
|
added default values for vaccine types on tests
|
2022-11-10 16:09:32 +01:00 |
|
Luis Aleixo
|
12b7b57593
|
moved default infectiousness_days value to SARSCoV2 class and added another test scenario
|
2022-10-10 11:15:05 +02:00 |
|
Luis Aleixo
|
9032a8815d
|
changed variable name in report_generator and added a retry decorator in test
|
2022-10-04 17:31:17 +02:00 |
|