Luis Aleixo
3c3758dfcd
removal of viable_to_RNA_ratio_distribution and infectious_dose_distribution from data registry
2024-05-27 10:42:46 +02:00
Luis Aleixo
39fc9d8e96
handled way to visualize custom value types (namely constant values); handled display of conditional probability plot
2024-05-27 10:42:46 +02:00
Luis Aleixo
9bc6252a4b
added cast to int when fetching env. var. that enables data service
2024-05-27 10:42:46 +02:00
Luis Aleixo
bf0d64063a
modifed symptomatic_vl_frequencies to fetch data from registry
2024-05-27 10:42:46 +02:00
Luis Aleixo
1b5f55fc06
modified data service host (QA)
2024-05-27 10:42:46 +02:00
Luis Aleixo
3914dabebb
changes on custom distributions definitions
2024-05-27 10:42:46 +02:00
Luis Aleixo
c02737cf92
updated schema to reflect v2.0.0
2024-05-27 10:42:46 +02:00
Luis Aleixo
74849cdee0
Merge branch 'feature/expected_reproduction_sr' into 'master'
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Expected number of new cases fix
See merge request caimira/caimira!493
2024-05-24 16:56:48 +02:00
Luis Aleixo
8ea055a8e1
changed docstring for expected_new_cases method
2024-05-24 16:42:03 +02:00
Luis Aleixo
ac04710d1b
ui modifications
2024-05-24 16:42:03 +02:00
Luis Aleixo
aa2e3be2cc
replaced max_people_for_sr to max_occupants_for_sr
2024-05-24 16:42:03 +02:00
Luis Aleixo
0c41b8e98a
changed the default value of short_range_occupants to be 0
2024-05-24 16:42:03 +02:00
Luis Aleixo
a0d8f45424
renamed new input "short_range_total_people" to "short_range_occupants"
2024-05-24 16:42:03 +02:00
Luis Aleixo
e61700aaad
added test for expected new cases
2024-05-24 16:42:03 +02:00
Luis Aleixo
10146f9a18
added baseline model with sr
2024-05-24 16:42:03 +02:00
Luis Aleixo
04b8e91639
updated new cases method
2024-05-24 16:42:03 +02:00
Luis Aleixo
ed5b0d0e27
minor version update
2024-05-24 16:42:03 +02:00
Luis Aleixo
a54da08789
renamed and moved total_people for short-range interactions to the exposure model
2024-05-24 16:42:03 +02:00
Luis Aleixo
70dc4a93d6
simplified report logic
2024-05-24 16:42:03 +02:00
Luis Aleixo
507e586757
re-factor expected new cases method
2024-05-24 16:42:03 +02:00
Luis Aleixo
abd6bb0767
display the input in form
2024-05-24 16:41:33 +02:00
Luis Aleixo
862010a9e0
added validation
2024-05-24 16:41:33 +02:00
Luis Aleixo
0352675878
added input to model generator from form
2024-05-24 16:41:33 +02:00
Luis Aleixo
e97a4cc805
added new model input
2024-05-24 16:41:33 +02:00
Luis Aleixo
3327b6e461
Merge branch 'feature/activity_types_fix' into 'master'
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Fixed error in placeholder for secondary school (data registry defaults)
See merge request caimira/caimira!494
2024-05-24 16:14:06 +02:00
Luis Aleixo
cf99568a70
modified way to restrict pytest version to be installed
2024-05-23 14:52:18 +02:00
Luis Aleixo
6202ac0874
fixed error in placeholder for secondary school (data registry defaults)
2024-05-23 14:47:49 +02:00
Luis Aleixo
477e5707c6
Merge branch 'bugfix/r0_short_range' into 'master'
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Fixed bug with expected new cases when short range interactions are defined
See merge request caimira/caimira!492
2024-04-21 13:07:04 +02:00
Luis Aleixo
00b5dc535d
fixed bug with expected new cases when short range interactions are defined
2024-04-20 13:54:46 +01:00
Luis Aleixo
585dba57e9
Merge branch 'changes/form_data_schema_data' into 'master'
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Added placeholder for activity types
See merge request caimira/caimira!489
2024-04-18 10:48:21 +02:00
Luis Aleixo
6f537e1df3
updated patch version
2024-04-18 10:35:22 +02:00
Luis Aleixo
6a69f91c90
added placeholder for activity types and fetched this data directly in form calculator
2024-04-18 10:28:39 +02:00
Luis Aleixo
a843c47b83
Merge branch 'feature/parallel-deposited-exposures-version' into 'master'
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Increased calculator (minor) version with parallel computing
See merge request caimira/caimira!491
2024-04-12 15:35:31 +02:00
Luis Aleixo
f06bb83d30
increased minor version with parallel computing
2024-04-11 15:44:40 +02:00
Luis Aleixo
5042f5d82f
Merge branch 'feature/parallel-deposited-exposures' into 'master'
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model: compute deposited exposures in parallel
See merge request caimira/caimira!490
2024-03-26 14:23:34 +01:00
Luis Aleixo
ddf7684798
added executor factory to ConcentrationModelJsonResponse class
2024-03-20 11:32:01 +01:00
Nicola Tarocco
c52d017a31
model: compute deposited exposures in parallel
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* compute deposited exposures by calculating each time window in a thread,
in parallel
* compute the CO2 concentration calcuation of each window in parallel
* the usage of multithreading speeds up the overall calculation by at
least by a factor of 3.
2024-03-17 18:12:39 +01:00
Luis Aleixo
4ed285d84a
Merge branch 'bugfix/env_var_and_report_bug' into 'master'
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Bugfix/env var and report bug
See merge request caimira/caimira!488
2024-03-11 15:22:47 +01:00
Luis Aleixo
24b3eba422
fixed bug on displaying inf. probability > 99.9%
2024-03-11 13:45:41 +01:00
Luis Aleixo
5e9d6501ae
added cast to int when fetching env. variables
2024-03-11 13:44:58 +01:00
Luis Aleixo
600830a495
Merge branch 'changes/enable_env_vars' into 'master'
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Handled environment variables to be consistent
See merge request caimira/caimira!486
2024-03-08 09:38:21 +01:00
Luis Aleixo
b0c9aefe34
disabled data service (OKD template)
2024-03-08 09:29:57 +01:00
Luis Aleixo
c5963a978a
Added timeout to fetch method
2024-03-06 14:26:35 +01:00
Luis Aleixo
c8cc0b0908
handled environment variables to be consistent
2024-03-05 17:03:19 +01:00
Luis Aleixo
e0c2e959a2
Merge branch 'update-deps' into 'master'
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upgrade dependencies
See merge request caimira/caimira!483
2024-02-28 14:55:06 +01:00
Nicola Tarocco
ddfe0b660e
tests: make report generation time limit configurable
2024-02-27 21:17:46 +01:00
Nicola Tarocco
d1555d77fc
upgrade dependencies
2024-02-27 21:10:27 +01:00
Luis Aleixo
55850f9971
Merge branch 'feature/profiler' into 'master'
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Profiler
See merge request caimira/caimira!480
2024-02-16 15:29:15 +01:00
Luis Aleixo
0590a27fdc
Merge branch 'feature/schema_updates' into 'master'
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Data Service - Schema Update
See merge request caimira/caimira!482
2024-02-14 14:49:19 +01:00
Luis Aleixo
f9d2fc39ec
mypy fix
2024-02-12 12:10:33 +01:00
