Phil Elson
ffbe9baba6
Improve the class hierachy, and add an extra ExpertApp test.
2020-11-19 12:49:19 +01:00
markus
936b339edf
fix pipeline
2020-11-19 12:44:39 +01:00
jdevine
7cc38af9c2
Changed test results to match new values, take 2
2020-11-17 19:44:46 +01:00
jdevine
d3af776951
Changed test results to match new values
2020-11-17 19:38:47 +01:00
jdevine
8f10706d3e
Updated tests a little
2020-11-17 19:24:07 +01:00
jdevine
b6403690e7
Updated activity types and profiles. Documentation updated as well.
2020-11-17 19:15:33 +01:00
Nicolas Mounet
1478bdd0b4
Merge branch 'feature/reproduction_rate' into 'master'
...
Implement an ExposureModel.reproduction_number, which is modelled by having precisely one infected person in the concentration model
Closes #98
See merge request cara/cara!88
2020-11-13 18:15:22 +00:00
Phil Elson
b4ebad785f
Allow the COVID calculator to have a blended Expiration type to represent conversations.
2020-11-13 16:42:29 +01:00
Phil Elson
31f628f9e5
Implement an ExposureModel.reproduction_number, which is modelled by having precisely one infected person in the concentration model.
2020-11-12 21:27:01 +01:00
Nicolas Mounet
3860e39959
Adding second coffee break in test on exposed presence interval (test_model_generator.py)
2020-11-12 18:58:25 +01:00
Nicolas Mounet
306e7fc31d
tests for modele_generator: replace test on presence intervals by two tests on infected and exposed presence intervals
2020-11-12 18:40:03 +01:00
Nicolas Mounet
439c9fee07
Merge branch 'master' of https://gitlab.cern.ch/cara/cara into develop/outside_temp_always_lower
2020-11-11 18:33:25 +01:00
Nicolas Mounet
103c820ada
Changing the r0 for June in tests, following the enforcement of a minimum temperature difference
2020-11-11 14:13:23 +01:00
markus
48e0b9d6cc
update test
2020-11-11 11:35:28 +01:00
Phil Elson
7b43eb0ea5
Rename Model to ConcentrationModel.
2020-11-10 17:19:19 +01:00
Phil Elson
200e7cb14b
Apply ExposureModel to both the expert and calculator apps.
2020-11-10 16:46:35 +01:00
Phil Elson
43da2d7521
Implement exposed activity/mask wearing independently of the infected group.
2020-11-10 15:45:39 +01:00
Nicolas Mounet
6dacddedbe
Improve readability of tests; adding 2 end-to-end tests (on infection probability)
2020-11-09 18:32:56 +01:00
Nicolas Mounet
c264e6bfc2
Moving Geneva temperature from cara/models.py to cara/data.py
2020-11-09 17:11:26 +01:00
Nicolas Mounet
d56731cebc
Adding a test of the interpolation in the PiecewiseConstant.refine method
2020-11-09 16:02:11 +01:00
Nicolas Mounet
5a5de009bc
Adding a test to that a finer mesh has no impact in itself
2020-11-09 12:37:40 +01:00
Phil Elson
8f973136e0
Allow WindowOpening to have more than one window of the given dimensions.
2020-11-09 09:43:47 +01:00
Phil Elson
eb2f8d99e8
Remove the use of the direct dictionary (un validated) data in favour of the FormData class.
2020-11-06 23:12:04 +01:00
Phil Elson
dc73bd77d1
Fix the form to model transformation.
2020-11-06 16:38:09 +01:00
Phil Elson
73abcf8596
Implement the coffee break method.
2020-11-06 16:12:59 +01:00
markus
aafc6f3b9f
use infected_start/finish to calculate present_intervals and coffee_times
2020-11-06 15:30:43 +01:00
Philip James Elson
c308387341
Merge branch 'key-validation' into 'master'
...
Key validation
See merge request cara/cara!38
2020-11-06 13:52:44 +00:00
Nicolas Mounet
ac208eb2be
Minor (transparent) fix in model_generator test for HEPA
2020-11-06 14:33:57 +01:00
markus
76d74132ef
use correct windows_open value-name
2020-11-06 14:06:15 +01:00
Nicolas Mounet
98f2b77350
Adding tests for window ventilation with HEPA in test_model_generator
2020-11-06 13:31:19 +01:00
Nicolas Mounet
c5e6540406
Adding a test for models (checking that until the first presence time of an infected person, the concentration remains at zero)
2020-11-06 13:19:17 +01:00
Nicolas Mounet
860d68583d
Adding tests for mechanical ventilation in test_model_generator
2020-11-06 13:18:01 +01:00
markus
d5d572c943
add test_key_validation
2020-11-06 12:36:53 +01:00
markus
a2512e2798
add test_ventilation
2020-11-06 10:05:15 +01:00
Philip James Elson
adb1f901ef
Merge branch 'develop/multiple_ventilation' into 'master'
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Multiple ventilations
Closes #44 and #18
See merge request cara/cara!29
2020-11-05 22:26:35 +00:00
Phil Elson
331b8e733f
Fix to use the updated PiecewiseConstant scheme for temperatures, and turn on testing, even if trivial, for the report generation.
2020-11-05 23:22:17 +01:00
Nicolas Mounet
d437c7e779
Adding test on the use of the model with a MultipleVentilation object (computing concentration); some fine tuning on other tests (list -> tuple)
2020-11-05 22:15:15 +01:00
Nicolas Mounet
28427cda52
Adding test on transition times for PiecewiseConstant objects; better layout on some other test
2020-11-05 21:46:10 +01:00
Nicolas Mounet
7e927490dd
Fixing multiple ventilation tests; adding a test on transition times for multiple ventilations; minor changes to window opening with time-dependent temperature test
2020-11-05 20:49:07 +01:00
Nicolas Mounet
3cffcb34af
Correcting multiple ventilation tests
2020-11-05 18:51:01 +01:00
Nicolas Mounet
f271b29ae1
Adding tests for multiple ventilation
2020-11-05 18:42:05 +01:00
Philip James Elson
bc88455d79
Merge branch 'present-intervals' into 'master'
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Present intervals
See merge request cara/cara!26
2020-11-05 15:39:16 +00:00
markus
f896cbf094
add test for present_intervals
2020-11-05 16:17:52 +01:00
Phil Elson
e663a89560
Parameterize the tests to allow easier debugging and simplify the logic in the test itself.
2020-11-05 12:55:00 +01:00
Philip James Elson
aadbb8c1dd
Merge branch 'develop/temperature_dependency' into 'master'
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Implementation of outside temperature time dependency
Closes #15
See merge request cara/cara!19
2020-11-05 11:43:36 +00:00
Nicolas Mounet
4ea8b70079
Adding tests on values beyond the interval of definition, for piecwise constant functions; some tests renaming
2020-11-05 12:07:26 +01:00
Phil Elson
f7853feb6f
Restructure the calculator app to have a strong separation between the form input and the form processing.
2020-11-05 11:05:40 +01:00
Nicolas Mounet
f9335710b6
Renaming PiecewiseconstantFunction class into PiecewiseConstant
2020-11-05 09:10:07 +01:00
Nicolas Mounet
3604c6c91c
Adding two tests for the hourly dependent model
2020-11-05 01:04:32 +01:00
Nicolas Mounet
ae5cb9536b
baseline_model in tests and expert.py, now use piecewise constant temperatures
2020-11-04 23:39:41 +01:00
