Commit graph

634 commits

Author SHA1 Message Date
markus
4d9aa07b49 remove misleading comment 2021-02-10 16:11:44 +01:00
markus
ee17e9f937 move buonanno model into function 2021-02-10 16:11:44 +01:00
markus
5f95c410e9 add hard-coded Ec 2021-02-10 16:11:44 +01:00
markus
e24d403a51 add specific model for buonanno comparison 2021-02-10 16:11:44 +01:00
markus
db37b58403 add specific class for buonanno comparison 2021-02-10 16:11:44 +01:00
markus
e850746c3b fix warning condition 2021-02-10 16:11:44 +01:00
markus
1ae52ffdf8 add spaces 2021-02-10 16:11:44 +01:00
markus
033e326ed8 add option for viral load distribution 2021-02-10 16:11:44 +01:00
markus
271e1c8dd8 use breathing rates 2021-02-10 16:11:44 +01:00
markus
eba70a6580 add lognormal_parameters 2021-02-10 16:11:44 +01:00
markus
1585eec6fd add type hinting to _generate_viral_loads 2021-02-10 16:11:44 +01:00
markus
8f3e279045 add lognormal method 2021-02-10 16:11:44 +01:00
markus
c8800b180d add beta_parameters 2021-02-10 16:11:44 +01:00
markus
2a1e80f8eb use new distribution for viral load 2021-02-10 16:11:44 +01:00
markus
4fe50ea22a remove viral load from MCVirus class 2021-02-10 16:11:44 +01:00
markus
3a16b683f3 add _generate_viral_loads 2021-02-10 16:11:44 +01:00
markus
487f01b0f8 remove plt.show() from logscale_hist 2021-02-10 16:11:44 +01:00
markus
34a035927a cleanup 2021-02-10 16:11:44 +01:00
markus
af9edf94ab add MCExposureModel class 2021-02-10 16:11:44 +01:00
markus
6e9f54de84 add MCConcentrationModel class 2021-02-10 16:11:44 +01:00
markus
433ee3d202 add MCInfectedPopulation class 2021-02-10 16:11:44 +01:00
markus
9532934ba0 add MCVirus class 2021-02-10 16:11:44 +01:00
markus
9beb1bcfb3 clarify scientific notation 2021-02-10 16:11:44 +01:00
markus
da718df7c5 add function for printing distribution information 2021-02-10 16:11:44 +01:00
markus
b67ffc5e2b import typing 2021-02-10 16:11:44 +01:00
markus
1c35917909 document logscale_hist 2021-02-10 16:11:44 +01:00
markus
a318cc1ecd add masked flag 2021-02-10 16:11:44 +01:00
markus
55c1a2124a use distribution for viral loads 2021-02-10 16:11:44 +01:00
markus
f4b0dd084c add masked flag 2021-02-10 16:11:44 +01:00
markus
bf3f21aef6 tweak diameters 2021-02-10 16:11:44 +01:00
markus
3308ffc872 clarify formula 2021-02-10 16:11:44 +01:00
markus
ee527631f4 remove print statement 2021-02-10 16:11:44 +01:00
markus
11561c10e8 fix time conversion factor 2021-02-10 16:11:44 +01:00
markus
b3327506fe add imports 2021-02-10 16:11:44 +01:00
markus
7cf262c98e remove unused import 2021-02-10 16:11:44 +01:00
markus
4c5305ff83 add generate_qr_values 2021-02-10 16:11:44 +01:00
markus
ecc35ee03c add unit conversions in qr-calculation 2021-02-10 16:11:44 +01:00
markus
03cad9d505 make breathing_rate optional 2021-02-10 16:11:44 +01:00
markus
06b6f9b4d7 reformat comments 2021-02-10 16:11:44 +01:00
markus
507cb7ffd9 restructure weibull_parameters 2021-02-10 16:11:44 +01:00
markus
ce453fc269 rename emission_concentration to emission 2021-02-10 16:11:44 +01:00
markus
a2eb8b07b1 add weibull parameters 2021-02-10 16:11:44 +01:00
markus
d096855bec add calculate_qr 2021-02-10 16:11:44 +01:00
markus
d01ebda19e create montecarlo.py 2021-02-10 16:11:44 +01:00
Philip James Elson
182294348f Merge branch 'feature/openshift-templates' into 'master'
Add OpenShift templates

See merge request cara/cara!135
2021-02-10 10:39:15 +00:00
Philip James Elson
858e51262e Merge branch 'feature/split_break_times' into 'master'
Split break times

Closes #118

See merge request cara/cara!129
2021-02-10 10:17:49 +00:00
Gabriella Azzopardi
ad82e73c27 Revert "Automate infected breaks DIV creation in JS"
This reverts commit c8fb1b68f65e41575ba698814e6d835cc3bf389f
2021-02-10 10:17:48 +00:00
Andre Henriques
bada12692b Merge branch 'upadate_Acknowledgements' into 'master'
upadate_thanks

See merge request cara/cara!137
2021-02-04 09:07:37 +00:00
Andre Henriques
0dcea6a9d0 upadate_thanks 2021-02-04 09:05:58 +00:00
Gabriella Azzopardi
582f7e0e3b Merge branch 'update_authors' into 'master'
update_authors_Nico

See merge request cara/cara!136
2021-02-04 08:45:13 +00:00