Commit graph

2246 commits

Author SHA1 Message Date
Luis Aleixo
7199143257 removed authentication methods and tests for data service 2024-01-31 11:50:12 +01:00
Luis Aleixo
d09d6f0ec8 methods updated to reflect changes 2024-01-26 10:30:59 +01:00
Luis Aleixo
b498e776f7 updated data registry to reflect changes in test data service 2024-01-26 10:30:37 +01:00
Luis Aleixo
667135595c Merge branch 'bugfix/CO2_form' into 'master'
Bugfix on CO2FormGeneration related with global store

See merge request caimira/caimira!479
2023-12-22 14:26:31 +01:00
Luis Aleixo
2deba13950 bugfix 2023-12-22 08:37:41 +00:00
Andre Henriques
45b81b1761 Merge branch 'feature/inject-data-service' into 'master'
inject data registry instance instead of static config

Closes #365

See merge request caimira/caimira!476
2023-12-20 14:44:25 +01:00
Luis Aleixo
ddecd91a85 increased version 2023-12-20 13:20:01 +00:00
Luis Aleixo
17a5fa6316 Merge branch 'feature/resizable_histogram' into 'master'
Result uncertainties resizable

See merge request caimira/caimira!477
2023-12-15 14:49:04 +01:00
Luis Aleixo
d3daca23d3 updated enum values and removed fixme references 2023-12-14 15:44:39 +01:00
Nicola Tarocco
00ff1af71d fix enums for data service 2023-12-14 15:34:08 +01:00
Luis Aleixo
d79ef934cb finished injection of data_service param 2023-12-14 15:34:08 +01:00
Luis Aleixo
20e8bf1df7 added data_service attr where needed 2023-12-14 15:34:08 +01:00
Nicola Tarocco
2abdd130cf config: remove Ref: config parsing 2023-12-14 15:34:08 +01:00
Nicola Tarocco
bb51eaa360 config: inject data registry instance instead of static config
* closes #365
2023-12-14 15:34:08 +01:00
Luis Aleixo
1ce1526701 Merge branch 'bugfix/precise_breaks' into 'master'
Fixed a bug related to the precise breaks

See merge request caimira/caimira!478
2023-12-14 14:57:17 +01:00
Luis Aleixo
e0867f1b27 updated minor version 2023-12-14 14:49:28 +01:00
Luis Aleixo
23c8959244 fixed bug related to specific breaks 2023-12-14 14:49:06 +01:00
Luis Aleixo
503a831f41 result uncertainties resizable 2023-12-13 15:57:57 +01:00
Andre Henriques
18456f4efa Merge branch 'feature/f_inf_in_emission_rate' into 'master'
Including viable-to-RNA ratio (f_inf) at the level of the emission rate

See merge request caimira/caimira!473
2023-12-13 10:50:26 +01:00
Luis Aleixo
2244a1dd19 updated concentration and dose labels to "Infectious Respiratory Particles" 2023-12-13 09:46:30 +01:00
Luis Aleixo
600cee9c9e minor version update 2023-12-12 16:23:07 +01:00
Nicolas Mounet
d53d62f3f3 Renaming finf in test_full_algorithm 2023-12-12 16:23:07 +01:00
Andre Henriques
c777d1a8de Merge branch 'nimounet-master-patch-52752' into 'master'
Update README.md - adding indications when running CAiMIRA in development mode

See merge request caimira/caimira!475
2023-12-12 11:30:42 +01:00
Nicolas Mounet
ece7b22fb7 Update README.md 2023-12-12 11:06:15 +01:00
Luis Aleixo
373ff09ea2 Merge branch 'update/fix_package_version_requirements' into 'master'
Updating package version requirements

See merge request caimira/caimira!472
2023-12-01 08:58:23 +01:00
Nicolas Mounet
1f90d08163 Multiplying all emission rate values by 0.305 (average of uniform distribution of f_inf - 0.01 to 0.6) in test_monte_carlo_full_models, to adapt it to f_inf now included in emission rate 2023-12-01 07:35:07 +01:00
Nicolas Mounet
605a2d3fb7 Adapting test_full_algorithm to new concentration with f_inf included (f_inf and HI displaced in SimpleConcentrationModel) 2023-12-01 07:33:26 +01:00
Nicolas Mounet
5b4345e40a Multiplying all known concentrations in test_exposure_model by f_inf=0.5, as concentration is now with f_inf included 2023-12-01 07:32:03 +01:00
Nicolas Mounet
b39131c14c Putting f_inf in emission rate, in models.py, and removing it from dose computation 2023-12-01 07:30:29 +01:00
Nicolas Mounet
e233ea43b1 Updating package requirements in setup.py to make the tests pass locally and to avoid the expert app to crash (mypy, pytest-mypy and ipympl) 2023-11-29 17:31:39 +01:00
Andre Henriques
d02404af5d Merge branch 'update/licenses' into 'master'
Open source licenses

See merge request caimira/caimira!469
2023-11-29 17:11:55 +01:00
Luis Aleixo
d70029d0ed Merge branch 'feature/CO2_fit' into 'master'
Fit ventilation and exhalation rates on CO2 sensor data

See merge request caimira/caimira!444
2023-11-22 15:43:00 +01:00
Luis Aleixo
f6abdc91c6 merged tests (custom and fixed) 2023-11-22 14:45:57 +01:00
Luis Aleixo
15e792a3ee modified UI text for CO2 file upload 2023-11-22 14:45:26 +01:00
Luis Aleixo
8fddfc3a78 Merge branch 'feature/store-token-validation' into 'master'
data service: add JWT expiration validation

See merge request caimira/caimira!470
2023-11-22 13:38:02 +01:00
Luis Aleixo
eca8e035c4 added test for natural and mechanical ventilation fitting algorithm 2023-11-22 10:15:04 +01:00
Nicola Tarocco
6cad72356d
data service: add JWT expiration validation 2023-11-21 14:34:05 +01:00
Luis Aleixo
afdc3cbec8 added explanative text and tooltip question mark 2023-11-21 09:57:21 +01:00
Luis Aleixo
3da67c8c95 add superclass FormData for CO2FormData and VirusFormData 2023-11-21 09:45:42 +01:00
Luis
ac2e8b799d Added validation for the case the header is not a string 2023-11-21 09:45:41 +01:00
Luis
43a6b6e0a6 moved interface methods from init file to co2_model_generator 2023-11-21 09:45:41 +01:00
Luis
96a2b614dc updated validation error message 2023-11-21 09:43:30 +01:00
Luis
0fb4cd895e replaced Population class by simplePopulation on CO2DataModel method 2023-11-21 09:43:29 +01:00
Luis Aleixo
9245166c4a simplified logic for building a CO2 model 2023-11-21 09:43:29 +01:00
Luis Aleixo
446cc88345 removed unused parameters 2023-11-21 09:43:29 +01:00
Luis Aleixo
2c8819934b updated blocking variable name 2023-11-21 09:43:29 +01:00
Luis Aleixo
f05d48221f updated jquery methods namely on the finding mechanism 2023-11-21 09:43:29 +01:00
Luis Aleixo
d377d6ae94 modified procedure to download CO2 template file 2023-11-21 09:43:29 +01:00
Luis Aleixo
3dc0364d2e optimised validation method 2023-11-21 09:43:29 +01:00
Luis Aleixo
58926b7163 updated no file error label 2023-11-21 09:43:29 +01:00