Commit graph

111 commits

Author SHA1 Message Date
Luis Aleixo
75aa7dbd0f fixed missing activity type 2023-01-24 16:08:41 +01:00
Luis Aleixo
f14aa0a8a5 added logic for precise breaks for both infected and exposed 2023-01-23 11:11:08 +01:00
Luis Aleixo
b04ebcfaf6 fixed numpy update error 2023-01-10 09:45:08 +01:00
Andre Henriques
1290f57deb Merge branch 'feature/bug_report_form' into 'master'
Check for nan values on probabilistic exposure

Closes #295

See merge request caimira/caimira!420
2022-12-15 17:32:40 +01:00
Luis Aleixo
87318a72c8 check for nan values on probabilistic exposure 2022-12-15 16:12:30 +00:00
Luis Aleixo
37d699d483 updated GitLab repository URL 2022-12-15 14:30:11 +00:00
Andre Henriques
d3a7fa5f2f Merge branch 'feature/global_incident_rates' into 'master'
Global incident rates

Closes #279

See merge request cara/caimira!405
2022-12-12 10:28:11 +01:00
Luis Aleixo
d2ea27ce79 removed ARIA references 2022-12-06 10:03:24 +01:00
Luis Aleixo
21953de4a2 added reference for external dependencies (react) in calculator.form.html.j2 file 2022-12-06 09:59:57 +01:00
Luis Aleixo
388465ba9b added tests for simulation time start and end with breaks 2022-12-06 09:59:57 +01:00
Luis Aleixo
0b37aeca7d added tests for aria breaks and precise activities 2022-12-06 09:59:57 +01:00
Luis Aleixo
180bf4dae5 completed validation on ARIA inputs model_generator 2022-12-06 09:59:57 +01:00
Luis Aleixo
5cce495692 changed precise activity type object structure 2022-12-06 09:59:57 +01:00
Luis Aleixo
06eaaf7dd1 added additional typing return types 2022-12-06 09:59:57 +01:00
Luis Aleixo
8cccb0eba9 added method and validation to generate precise activities from ARIA 2022-12-06 09:59:57 +01:00
Luis Aleixo
f8eb35f18b added a method to generate break times based on ARIA inputs 2022-12-06 09:59:57 +01:00
Luis Aleixo
a4b2801f0b additional typo 2022-12-05 17:08:09 +01:00
Luis Aleixo
09c22cda6e typo issue 292 2022-12-05 17:04:52 +01:00
Luis Aleixo
1cbc1d1113 handle WHO message when input changes by user 2022-11-29 16:50:54 +01:00
Luis Aleixo
2d909bc905 Added a 0-value verification for geographical cases 2022-11-25 16:19:46 +01:00
Luis Aleixo
5915a0d520 used 7-day rolling average 2022-11-25 16:19:45 +01:00
Luis Aleixo
1a93439984 added incidence rate from API to UI 2022-11-25 16:19:45 +01:00
Luis Aleixo
917567c5df added server side API for global incident rates 2022-11-25 16:18:48 +01:00
Andre Henriques
20b65b6081 Merge branch 'feature/HI_data' into 'master'
Host Immunity Data

See merge request cara/caimira!401
2022-11-23 16:54:52 +01:00
Luis Aleixo
e3215d0f5c added return type for function that has variable annotations 2022-11-18 11:55:09 +01:00
Luis Aleixo
2b19ea163f updated userguide for VE data and moved vaccination block under virus type 2022-11-14 08:57:16 +01:00
Luis Aleixo
db85c41fa0 added VE script and excel file 2022-11-10 16:09:33 +01:00
Luis Aleixo
a239b4f1ba Increased version number 2022-11-10 16:09:33 +01:00
Luis Aleixo
e82f6e58d2 test for host immunity vectorisation 2022-11-10 16:09:32 +01:00
Luis Aleixo
98b08a05e0 moved select options (primary and booster vaccines) to JS 2022-11-10 16:09:32 +01:00
Luis Aleixo
9e4d1c0937 updated VE and added default values on UI components 2022-11-10 16:09:32 +01:00
Luis Aleixo
01c2454e0d new vaccination data with VE < 0 as 0 and " or " entries counting on both vaccines 2022-11-10 16:09:32 +01:00
Luis Aleixo
34f32006f4 added primary and booster vaccine input tuple validation 2022-11-10 16:09:32 +01:00
Luis Aleixo
65afb91b61 handled display errors 2022-11-10 16:09:32 +01:00
Luis Aleixo
4ab95fcfaa added default values for vaccine types on tests 2022-11-10 16:09:32 +01:00
Luis Aleixo
4dee41a41e Added UI input field for vaccination (primary and booster) 2022-11-10 16:09:32 +01:00
Luis Aleixo
b2d6a308a5 added vaccine effectiveness data to __init__.py in data folder 2022-11-10 16:09:32 +01:00
Luis Aleixo
e87a5e2830 added backend changes for vaccination data 2022-11-10 16:09:32 +01:00
Luis Aleixo
e35edeab44 updated exh_coef variable name 2022-11-09 11:13:27 +01:00
CERN\Andrejh
a5b295a165 exh_coef additional explanation 2022-11-08 17:40:25 +01:00
Luis Aleixo
599603126f Updated methods docstrings 2022-11-08 17:40:25 +01:00
Luis Aleixo
997eb7eebb updated documentation 2022-11-08 17:40:25 +01:00
Luis Aleixo
230f1cedff Adapted dilution factor formula with exhalation coefficient 2022-11-08 17:40:25 +01:00
Andre Henriques
b958ff634d Merge branch 'feature/post_init_diameter_validation' into 'master'
Check for the diameter type

See merge request cara/caimira!382
2022-11-04 17:56:47 +01:00
Luis Aleixo
cf330ab9af updated t0 formula according to published paper 2022-11-03 09:15:05 +01:00
Luis Aleixo
eb87574634 Updated docs text 2022-11-02 16:53:19 +01:00
Luis Aleixo
4f091946ca Updated documentation 2022-11-02 15:41:20 +01:00
Luis Aleixo
a898e72bd5 Q0φ with instead of BR directly 2022-11-02 15:40:40 +01:00
Luis Aleixo
44f016bb16 updated message errors and added room volume vectorisation test when as a ventilation parameter 2022-11-02 14:57:43 +01:00
Luis Aleixo
a32c4f1ae3 update to documentation on dilution factor 2022-10-28 12:17:12 +02:00