Commit graph

1614 commits

Author SHA1 Message Date
CERN\Andrejh
a24e4fd73e update docstring 2022-06-09 16:50:23 +02:00
Philip Elson
9231890aa4 Merge branch 'feature/code_cleanout' into 'master'
Code cleanup

Closes #250 and #249

See merge request cara/cara!364
2022-06-09 09:46:32 +02:00
Luis Aleixo
c0f7a3ccf6 Code cleanup 2022-06-09 09:46:31 +02:00
Andre Henriques
04cb1e36c9 Merge branch 'feature/report_image_print_version' into 'master'
Handled images on printable report and added report link on title

See merge request cara/cara!361
2022-06-08 16:08:44 +02:00
Andre Henriques
4a5311de4f Merge branch 'seeds_removed' into 'master'
Removed seeds from tests

Closes #245

See merge request cara/cara!362
2022-06-07 10:04:00 +02:00
Luis Aleixo
0f373a5f3c Handled model generation in test_full_algorithm.py test 2022-06-03 09:19:48 +02:00
Luis Aleixo
8601e51adb Removed np.seed from tests and added retry decorator 2022-06-02 16:45:54 +02:00
Luis Aleixo
3dba74c23f Handled images on printable report and added link from title 2022-06-02 15:59:22 +02:00
Andre Henriques
9ebb521769 Merge branch 'feature/new_viral_data' into 'master'
Added weibull_min dist to data.py on virus viral_load_in_sputum

See merge request cara/cara!339
2022-06-01 08:58:57 +02:00
Luis Aleixo
59e24e0f47 Added the new distribution for the viral_load_in_sputum. Tests were updated 2022-05-31 17:44:12 +02:00
Andre Henriques
8fe4939757 Merge branch 'feature/multiple_PI' into 'master'
Report with multiple P(I)

Closes #258

See merge request cara/cara!358
2022-05-31 17:01:27 +02:00
Luis Aleixo
f15f2368b3 typo in short-range words 2022-05-31 16:15:24 +02:00
Luis Aleixo
c407ca4518 reduced jet size on animation for short range 2022-05-31 16:03:36 +02:00
Luis Aleixo
4f37b2db8d Added the new LogCustom distribution into the virus distributions 2022-05-31 15:21:09 +02:00
Luis Aleixo
071cbbb7b0 Modified message declaration on the if statements of the report for different warning levels 2022-05-31 14:54:17 +02:00
Luis Aleixo
3a6daed66d Changed images for short and long range P(I) 2022-05-31 14:40:57 +02:00
Andre Henriques
f346301816 Merge branch 'feature/short_range_paper_update' into 'master'
reference short-range paper from Yuguo Li

See merge request cara/cara!360
2022-05-31 11:28:30 +02:00
CERN\Andrejh
100d8bd816 name correction 2022-05-31 11:19:26 +02:00
CERN\Andrejh
37c1ecb636 correction to naming convention 2022-05-31 11:05:28 +02:00
CERN\Andrejh
ac03fb5611 typo text 2022-05-31 10:27:49 +02:00
Andre Henriques
ec4c5732b2 Merge branch 'feature/expert_app_initial_changes' into 'master'
Initial changes so that the expert app possess most of the the calculator features

See merge request cara/cara!348
2022-05-31 10:23:36 +02:00
CERN\Andrejh
7850c91cee reference short-range paper from Yuguo Li 2022-05-30 17:33:37 +02:00
Luis Aleixo
894d95d3ce Adapted green level cern message 2022-05-30 12:21:46 +02:00
Andre Henriques
b3a02e9c52 Merge branch 'feature/new_green' into 'master'
new statement for Green level

See merge request cara/cara!359
2022-05-30 12:04:37 +02:00
Luis Aleixo
164333b1a2 Adapted P(I) and R0 report messages 2022-05-30 11:45:06 +02:00
Luis Aleixo
34353bb3ce rearranged if statements on report.html.j2 file 2022-05-30 11:34:45 +02:00
Luis Aleixo
431fa3b33d Updated Custom and LogCustom classes' docstring 2022-05-30 11:16:30 +02:00
Luis Aleixo
9f5311f42e Added LogCustom class and changed max function on the distribution 2022-05-30 10:38:31 +02:00
CERN\Andrejh
1b4d297afb new statement 2022-05-30 10:08:45 +02:00
Andre Henriques
53fc660346 Merge branch 'feature/retry_decorator_tests' into 'master'
Removed retry and types-retry decorators from requirements

See merge request cara/cara!357
2022-05-30 09:26:20 +02:00
Luis Aleixo
844d403c90 changed retry decorator to be only in the tests and not in the core installation 2022-05-30 09:18:01 +02:00
Germain Personne
f6807619e2 Improved the Virus data call 2022-05-25 13:50:00 +02:00
Germain Personne
c231d5a686 Moved the Virus data block to be inside Infected 2022-05-25 12:12:14 +02:00
Luis Aleixo
10e54c615c Added images to the interactions (with and without short range) 2022-05-25 11:18:58 +02:00
Luis Aleixo
07869bceb8 Adapted the short range probability message and corrected mobile resize for text box 2022-05-25 11:18:57 +02:00
Luis Aleixo
937ff8c2ed Added long range interaction into the alternative scenarios 2022-05-25 11:18:57 +02:00
Luis Aleixo
971d9294de adapted report to display multiple PI 2022-05-25 11:18:57 +02:00
Germain Personne
a5840b63a8 Improved displayed total volume, raised the maximum value of the air supply flow rate to 5000 m³/h, lowered the maximum value of air exchange per hour to 20h⁻¹ 2022-05-25 09:42:06 +02:00
Luis Aleixo
c112fa88e4 Removed retry and types-retry decorators from requirements 2022-05-25 09:25:10 +02:00
Luis Aleixo
8ad3b41796 Handled Virus custom choice and cleaned the code 2022-05-24 14:45:18 +02:00
Germain Personne
b64a221c75 Multiplied the node humidity value by 100 to be displayed as percentage 2022-05-23 15:28:58 +02:00
Germain Personne
8e77941a29 changed relative humidity to be accorder to models humidity 2022-05-23 15:21:19 +02:00
Germain Personne
9a6c7ec3a1 Changed the relative humidity to be a percentage in a range of 20-80% 2022-05-23 14:52:32 +02:00
Luis Aleixo
0c59dcb905 Added custom distribution for weibull_min dist 2022-05-13 16:50:20 +02:00
Germain Personne
587379f20d resolved a bug regarding exposed and infected presence definitions (changed present_times for boundaries()) 2022-05-13 16:43:24 +02:00
Germain Personne
71b6c59e65 Merge branch 'master' into feature/expert_app_header 2022-05-13 10:39:04 +02:00
Germain Personne
53c82146f6 Missing fragment of ExposureComparissonResult from previous commit 2022-05-12 16:30:28 +02:00
Germain Personne
18cce44afa Adapted the plot to not have the y axis' legend hidden by the matlpotlib icons, added a better looking legend to the plot, made the comparison results work, added cummulative doses' curves for ExposureComparissonResult and ExposureModelResult, modified the viral load to be displayed as scientific writing on the UI 2022-05-12 16:26:45 +02:00
Luis Aleixo
58811914c5 Merge branch 'feature/zenodo' into 'master'
Added repository zenodo reference

Closes #265

See merge request cara/cara!355
2022-05-11 17:16:46 +02:00
Luis Aleixo
26cf6fb0f0 added missing newline 2022-05-11 17:09:32 +02:00