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Author SHA1 Message Date
Luis Aleixo
c8f2b32fef modified CO2 concentration when ventilation is close to 0. (RR) 2023-10-04 16:00:11 +02:00
Nicolas Mounet
2ddff9cbba Merge branch 'feature/matplotlib_3.8.0_update' into 'master' 
Expert apps updates following new matplotlib release

See merge request caimira/caimira!464
 2023-10-03 15:29:53 +02:00
Luis Aleixo
6a9d0c0ec2 expert apps updates following new matplotlib release 2023-10-03 15:14:51 +02:00
Luis Aleixo
93d59bfe82 Merge branch 'bugfix/data_service' into 'master' 
Bugfix with data service usage

See merge request caimira/caimira!461
 2023-09-14 16:14:25 +02:00
Luis Aleixo
4f1a497954 modified env var fetch method 2023-09-13 09:49:06 +02:00
Luis Aleixo
33888b13b8 Merge branch 'feature/vl_improvement' into 'master' 
Modified method to calculate conditional probability

See merge request caimira/caimira!454
 2023-09-05 10:40:24 +02:00
Luis Aleixo
1d72ef7aa7 increased patch version 2023-09-05 10:17:43 +02:00
Nicolas Mounet
878e4b26cd Increasing number of samples in test_conditional_probability.py 2023-09-02 11:21:17 +02:00
Nicolas Mounet
82f4e14905 relaxing tolerances on conditional prob. test 2023-09-01 16:18:10 +02:00
Nicolas Mounet
f8530d4724 Centering the interval for vl uncertainty computation in report generator -> improving test accuracy 2023-09-01 15:21:04 +02:00
Luis Aleixo
27da077493 added full vl value on key of viral load 2023-08-04 11:17:10 +02:00
Luis Aleixo
77143c13c0 added vl_data on percentiles 2023-08-03 16:16:26 +02:00
Luis Aleixo
1abfe3cfe5 added a method to manufacture conditional probability and send it in the report 2023-08-03 15:01:31 +02:00
Luis Aleixo
96e9aead44 removed manufacture viral load scenarios method and related references 2023-08-03 15:01:06 +02:00
Luis Aleixo
c4d527f1a5 solved seed problem with conditional prob test 2023-08-02 14:49:03 +02:00
Luis Aleixo
6622315dd9 changed mypy type 2023-07-31 17:33:44 +02:00
Luis Aleixo
b6e1afc2a6 Increased test sample size 2023-07-31 17:05:48 +02:00
Luis Aleixo
88c23da962 increased sample size 2023-07-28 17:39:17 +02:00
Luis Aleixo
7d338d3e2d separated vl method and added a test file 2023-07-28 17:39:17 +02:00
Luis Aleixo
fe60e1703f added mypy typing check 2023-07-28 17:39:17 +02:00
Luis Aleixo
b6051778eb modified method to calculate conditional probability 2023-07-28 17:39:16 +02:00
Nicolas Mounet
e854efc451 Merge branch 'feature/generic_population_class' into 'master' 
Created a simple population class for the CO2 concentration model

Closes #296

See merge request caimira/caimira!459
 2023-07-28 10:39:12 +02:00
Nicolas Mounet
d26218c7e5 Inputing arguments as keywords in populations definition, in test_exposure_model 2023-07-28 10:34:21 +02:00
Luis Aleixo
8e877ec357 created a simple population class for the CO2 concentration model 2023-07-25 13:18:33 +02:00
Luis Aleixo
68bc8cc6a1 Merge branch 'feature/vl_dist' into 'master' 
Propagate viral load distribution to front-end side

See merge request caimira/caimira!457
 2023-07-19 18:32:05 +02:00
Luis Aleixo
a611188ecc Merge branch 'bugfix/make-data-service-optional' into 'master' 
data service: add toggle env var to make it optional

See merge request caimira/caimira!458
 2023-07-19 18:28:52 +02:00
Luis Aleixo
4b0fc58a3e updated deploymentconfig bool value 2023-07-19 18:14:02 +02:00
Luis Aleixo
e732fb48d7 data service: add toggle env var to make it optional 2023-07-19 11:39:39 +02:00
Luis Aleixo
3d2e7f57d7 Merge branch 'feature/WP3_first_integration' into 'master' 
Developed server side API connection to Service Data (WP3)

See merge request caimira/caimira!453
 2023-07-18 09:29:14 +02:00
Luis Aleixo
c9a64a2d92 handled exceptions 2023-07-17 17:28:46 +02:00
Luis Aleixo
f9fb2a12fb added a test file 2023-07-17 17:28:09 +02:00
Luis Aleixo
38587c43ef added the data service as an external component (class) 2023-07-17 17:28:09 +02:00
Luis Aleixo
9c33ac1df0 updated server-side logic 2023-07-17 17:28:09 +02:00
Luis Aleixo
6cc6121075 developed server side API connection to Service Data (WP3) 2023-07-17 17:28:09 +02:00
Luis Aleixo
43630cda2c added logarithm of viral load distribution to jinja variable 2023-07-14 11:23:42 +02:00
Luis Aleixo
2d1e8af30f added viral load distribution as a variable to display in the front-end side 2023-07-12 17:11:03 +02:00
Nicolas Mounet
fcee962a83 Merge branch 'feature/dose_list' into 'master' 
New logic for probability of infection

See merge request caimira/caimira!451
 2023-06-29 15:07:00 +02:00
Luis Aleixo
07d692b964 expanded pytest raises on tests to each single case 2023-06-29 10:02:26 +01:00
Luis Aleixo
2ec9a7f262 removed unused block of code 2023-06-29 10:01:59 +01:00
Andre Henriques
f6579fb31a Merge branch 'feature/CO2_profile' into 'master' 
CO₂ Concentration Plot

Closes #307 and #297

See merge request caimira/caimira!428
 2023-06-16 14:58:58 +02:00
Luis Aleixo
96da4cc980 version update 2023-06-15 14:53:52 +02:00
Andre Henriques
bacf648dbb Merge branch 'bugfix/histogram' into 'master' 
Fixed dash line (mean of P(I)) on histogram

See merge request caimira/caimira!452
 2023-06-15 10:49:28 +02:00
Luis Aleixo
706c352392 removed unused methods 2023-06-13 16:00:30 +02:00
Luis Aleixo
f45ca3904d added logic with IntPiecewiseConstant for dynamic CO2 2023-06-13 15:58:27 +02:00
Luis Aleixo
a261ac4bf0 added method to combine different present intervals 2023-06-12 15:19:55 +02:00
Luis Aleixo
4f6a967864 added way to determine size of tooltip 2023-06-12 15:19:06 +02:00
Luis Aleixo
800578f031 adjustments to d3 plot 2023-06-12 15:19:06 +02:00
Luis Aleixo
34cdfa536c changed color scheme for build generic graph 2023-06-12 15:19:06 +02:00
Luis Aleixo
bc7dae3610 changed CO2 label and added hlines with legends 2023-06-12 15:19:06 +02:00
Luis Aleixo
b17a1b991a modified draw alternative scenarios method to be a generic plot and added export CO2 cvs data 2023-06-12 15:19:06 +02:00